Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18809 | Canola | nucleus | 97.51 | 100.0 |
| Bra001164.1-P | Field mustard | nucleus | 77.58 | 77.58 |
| AT3G05690.2 | Thale cress | mitochondrion | 81.49 | 68.98 |
| Bra009200.1-P | Field mustard | nucleus | 54.8 | 57.68 |
| Solyc10g081840.1.1 | Tomato | nucleus | 22.06 | 40.26 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 45.91 | 39.33 |
| KRH68018 | Soybean | nucleus | 44.48 | 38.11 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 27.05 | 37.81 |
| KRH72156 | Soybean | nucleus | 44.84 | 37.61 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 45.2 | 36.71 |
| KRH32866 | Soybean | nucleus | 42.7 | 36.7 |
| PGSC0003DMT400072322 | Potato | nucleus | 24.91 | 35.71 |
| Solyc01g006930.2.1 | Tomato | nucleus | 38.08 | 34.41 |
| PGSC0003DMT400055061 | Potato | nucleus | 37.72 | 34.08 |
| Bra023913.1-P | Field mustard | nucleus | 19.22 | 30.0 |
| Bra032395.1-P | Field mustard | nucleus | 19.22 | 29.51 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 33.1 | 28.62 |
| Bra014368.1-P | Field mustard | nucleus | 23.13 | 28.14 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 32.38 | 27.91 |
| Zm00001d031092_P001 | Maize | nucleus | 32.74 | 27.88 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 33.45 | 27.73 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 33.45 | 27.57 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 31.67 | 27.55 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 33.45 | 27.49 |
| Bra005397.1-P | Field mustard | nucleus | 19.22 | 27.41 |
| Os12t0618600-01 | Rice | nucleus | 30.25 | 27.33 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 33.1 | 27.27 |
| Zm00001d033215_P001 | Maize | nucleus | 30.61 | 26.71 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 32.03 | 26.71 |
| Bra023378.1-P | Field mustard | nucleus | 22.78 | 26.67 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 30.25 | 26.4 |
| Bra006165.1-P | Field mustard | nucleus | 23.49 | 25.98 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 29.89 | 25.93 |
| Bra030996.1-P | Field mustard | mitochondrion | 19.22 | 25.59 |
| Bra030899.1-P | Field mustard | nucleus | 22.78 | 25.5 |
| Bra037968.1-P | Field mustard | nucleus | 23.13 | 25.49 |
| Zm00001d013676_P002 | Maize | nucleus | 30.61 | 25.22 |
| KXG37939 | Sorghum | nucleus | 30.96 | 25.22 |
| Os03t0647600-01 | Rice | nucleus | 31.32 | 24.86 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 32.74 | 23.59 |
| Bra008878.1-P | Field mustard | nucleus | 23.49 | 23.32 |
| OQU79642 | Sorghum | plastid | 33.81 | 22.67 |
| Bra021527.1-P | Field mustard | nucleus | 24.2 | 22.08 |
| Bra008052.1-P | Field mustard | nucleus | 22.78 | 21.99 |
| Zm00001d007882_P001 | Maize | nucleus | 22.78 | 21.77 |
| Bra016031.1-P | Field mustard | nucleus | 24.56 | 21.43 |
| Os07t0158500-00 | Rice | nucleus | 28.83 | 21.37 |
| Bra031242.1-P | Field mustard | nucleus | 22.06 | 21.02 |
| OQU88458 | Sorghum | nucleus | 23.84 | 20.74 |
| Bra001806.1-P | Field mustard | nucleus | 22.06 | 20.13 |
Protein Annotations
| EnsemblPlants:Bra040529.1 | EnsemblPlants:Bra040529.1-P | EnsemblPlantsGene:Bra040529 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 |
| InterPro:NFYA | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | PFAM:PF02045 | PFscan:PS51152 | SEG:seg |
| SMART:SM00521 | UniParc:UPI000253ED9B | UniProt:M4FHF1 | MapMan:15.5.51.1 | : | : |
Description
AT3G05690 (E=6e-105) UNE8, ATHAP2B, HAP2B, NF-YA2 | NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2); transcription factor
Coordinates
chrScaffold000215:+:25328..27095
Molecular Weight (calculated)
30438.0 Da
IEP (calculated)
9.710
GRAVY (calculated)
-0.481
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQTSPQIS WWNAFGSQPL PPVSLAGDSD SFGSAVETEH GVDKQNNSAT HLAFSLGDVK SSRVVAKPHG AAFSMQPPCL ELGFTQQQMY PCVEQGYYGV
101: VSAYGSQSRV MLPLNMETED GTIFVNSKQY HAIIRRRQSR AKAAAALHPP LAVLDQNKLS SRGRKPYMHH SRHLHALRRP RGSGGRFLNT KSGTDAKKAD
201: GTKQTQSQAM SQQSNSQNSE VLHPESGTMN LSTGLNVSGS EVTSMNYFLS SPVHPLGGMV MPGKWTASVA AMDNGCCYFK T
101: VSAYGSQSRV MLPLNMETED GTIFVNSKQY HAIIRRRQSR AKAAAALHPP LAVLDQNKLS SRGRKPYMHH SRHLHALRRP RGSGGRFLNT KSGTDAKKAD
201: GTKQTQSQAM SQQSNSQNSE VLHPESGTMN LSTGLNVSGS EVTSMNYFLS SPVHPLGGMV MPGKWTASVA AMDNGCCYFK T
001: MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
Arabidopsis Description
UNE8Nuclear factor Y, subunit A2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSX7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.