Factsheet for HORVU5Hr1G092700.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G375500.1	Wheat	nucleus	77.69	93.81
TraesCS5D01G383000.1	Wheat	nucleus	77.69	93.23
TraesCS5A01G373500.1	Wheat	nucleus	77.18	92.33
Zm00001d033215_P001	Maize	nucleus	53.85	65.22
Os03t0647600-01	Rice	nucleus	56.92	62.71
KXG37939	Sorghum	nucleus	54.62	61.74
HORVU5Hr1G007890.1	Barley	nucleus	52.56	60.12
Zm00001d013676_P002	Maize	nucleus	51.54	58.94
Solyc10g081840.1.1	Tomato	nucleus	17.18	43.51
CDY05192	Canola	nucleus	17.69	38.55
PGSC0003DMT400072322	Potato	nucleus	18.97	37.76
VIT_08s0032g01190.t01	Wine grape	nucleus	31.54	37.5
AT5G06510.2	Thale cress	nucleus	25.13	36.43
HORVU0Hr1G010230.1	Barley	nucleus	14.62	35.85
KRH68018	Soybean	nucleus	29.74	35.37
KRH72156	Soybean	nucleus	30.26	35.22
PGSC0003DMT400055061	Potato	nucleus	27.44	34.41
KRH32866	Soybean	nucleus	28.21	33.64
CDY18809	Canola	nucleus	23.59	33.58
Solyc01g006930.2.1	Tomato	nucleus	26.67	33.44
Bra040529.1-P	Field mustard	nucleus	23.59	32.74
Bra001164.1-P	Field mustard	nucleus	23.59	32.74
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	28.97	32.66
CDY14662	Canola	nucleus	23.33	32.38
CDX74133	Canola	nucleus	23.33	32.38
Bra009200.1-P	Field mustard	nucleus	22.05	32.21
CDX70098	Canola	nucleus	22.05	32.21
CDX98930	Canola	nucleus	21.54	31.46
HORVU5Hr1G010600.10	Barley	nucleus	15.9	28.97
AT3G05690.2	Thale cress	mitochondrion	24.1	28.31
HORVU4Hr1G075830.4	Barley	nucleus	19.74	26.55
HORVU2Hr1G032130.4	Barley	nucleus	19.23	25.0
HORVU6Hr1G081080.12	Barley	nucleus	16.92	23.49

Protein Annotations

EnsemblPlants:HORVU5Hr1G092700.5	EnsemblPlantsGene:HORVU5Hr1G092700	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001289	InterPro:NFYA
PANTHER:PTHR12632	PANTHER:PTHR12632:SF17	PFAM:PF02045	PFscan:PS51152	SEG:seg	SMART:SM00521
UniParc:UPI000B476342	UniProt:A0A287S921	MapMan:15.5.51.1	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:589119966..589124290

Molecular Weight (calculated)

42130.9 Da

IEP (calculated)

9.585

GRAVY (calculated)

-0.549

Length

390 amino acids

Sequence
(BLAST)

001: MMSFKAHDGF GQVGQATNGG GGGGGGGGAP VPWWAVSQML YGDPAAAMSP TPETEARRDG QFQVVPRAQG ILDPAPQQPA PATRSGAPEV LKFSVFLGNL
101: ESGGNKGEKA LEHSATIALQ SPLPEYNSRF EFGPGPSMMS SGYPSAEQCY GLLTTYAMKS TPGGRLLLPL NATADAPIYV NAKQYEGILR RRRARAKVER
201: ENQLVKGRKV SQHFHQVHCH CHCHYIDRGK QTSSIRQHKN NTSPKHLNFF QAFSLALMIM SQPYLHESRH RHAMRRARGT GGRFLNTKKE GGGGKDAPGG
301: GKRAECTPPT RFATSPSSVI PHSRSSISSL SGSEVSSMYD HDDVDHYNSI EQLRTPFFTP LPIIMDGEHG ASAPFKWATA ADGCCELLKA

Best Arabidopsis Sequence Match ( AT3G05690.1 )
(BLAST)

001: MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT

Arabidopsis Description

UNE8Nuclear factor Y, subunit A2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSX7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.