Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18809 | Canola | nucleus | 83.24 | 54.38 |
| CDX74133 | Canola | nucleus | 77.09 | 49.11 |
| CDY14662 | Canola | nucleus | 77.09 | 49.11 |
| CDX98930 | Canola | nucleus | 66.48 | 44.57 |
| AT3G05690.2 | Thale cress | mitochondrion | 81.01 | 43.67 |
| CDX70098 | Canola | nucleus | 64.25 | 43.07 |
| Solyc10g081840.1.1 | Tomato | nucleus | 31.28 | 36.36 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 39.11 | 34.83 |
| PGSC0003DMT400072322 | Potato | nucleus | 33.52 | 30.61 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 51.96 | 28.35 |
| KRH68018 | Soybean | nucleus | 51.4 | 28.05 |
| CDY02298 | Canola | nucleus | 27.93 | 27.32 |
| KRH32866 | Soybean | nucleus | 49.16 | 26.91 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 51.96 | 26.88 |
| KRH72156 | Soybean | nucleus | 50.28 | 26.87 |
| CDX78492 | Canola | nucleus | 30.73 | 26.83 |
| CDY09571 | Canola | nucleus | 27.37 | 26.78 |
| CDY37330 | Canola | nucleus | 26.26 | 26.11 |
| CDX84285 | Canola | nucleus | 28.49 | 26.02 |
| CDY31636 | Canola | nucleus | 28.49 | 25.89 |
| Solyc01g006930.2.1 | Tomato | nucleus | 42.46 | 24.44 |
| PGSC0003DMT400055061 | Potato | nucleus | 42.46 | 24.44 |
| CDY26138 | Canola | nucleus | 31.84 | 24.26 |
| CDY69800 | Canola | nucleus | 31.28 | 24.24 |
| CDX91161 | Canola | nucleus | 29.61 | 24.2 |
| CDY02477 | Canola | nucleus | 29.61 | 23.25 |
| CDY56623 | Canola | nucleus | 30.17 | 23.08 |
| CDX85686 | Canola | nucleus | 30.17 | 22.88 |
| Os12t0618600-01 | Rice | nucleus | 37.99 | 21.86 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 29.05 | 21.67 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 40.78 | 21.66 |
| Zm00001d031092_P001 | Maize | nucleus | 39.66 | 21.52 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 38.55 | 21.23 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 38.55 | 21.17 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 39.66 | 20.94 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 39.66 | 20.82 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 39.66 | 20.76 |
| Zm00001d033215_P001 | Maize | nucleus | 36.87 | 20.5 |
| CDX70480 | Canola | nucleus | 29.61 | 20.46 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 36.87 | 20.43 |
| CDY51397 | Canola | nucleus | 32.4 | 20.35 |
| CDY48025 | Canola | nucleus | 32.96 | 20.27 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 38.55 | 20.23 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 36.31 | 20.19 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 36.31 | 20.06 |
| KXG37939 | Sorghum | nucleus | 37.43 | 19.42 |
| Os03t0647600-01 | Rice | nucleus | 37.99 | 19.21 |
| Zm00001d013676_P002 | Maize | nucleus | 36.31 | 19.06 |
| CDX96435 | Canola | nucleus | 33.52 | 18.63 |
| CDY39091 | Canola | nucleus | 31.84 | 18.51 |
| CDY30854 | Canola | nucleus | 15.08 | 18.49 |
| CDY33084 | Canola | nucleus | 30.73 | 18.39 |
| CDY53967 | Canola | nucleus | 29.05 | 18.31 |
| CDX97206 | Canola | nucleus | 29.05 | 18.25 |
| CDX82223 | Canola | nucleus | 28.49 | 18.21 |
| CDX82133 | Canola | nucleus | 32.4 | 18.18 |
| Zm00001d007882_P001 | Maize | nucleus | 29.61 | 18.03 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 38.55 | 17.69 |
| Os07t0158500-00 | Rice | nucleus | 37.43 | 17.68 |
| CDY33253 | Canola | nucleus | 30.17 | 17.53 |
| CDX72950 | Canola | nucleus | 33.52 | 17.49 |
| OQU79642 | Sorghum | plastid | 40.22 | 17.18 |
| CDY32398 | Canola | nucleus | 28.49 | 17.11 |
| CDY06393 | Canola | nucleus | 28.49 | 17.11 |
| OQU88458 | Sorghum | nucleus | 30.73 | 17.03 |
| CDY21741 | Canola | nucleus | 30.17 | 16.77 |
| CDY19591 | Canola | nucleus | 26.26 | 15.99 |
| CDY70458 | Canola | nucleus | 33.52 | 14.81 |
| CDX81837 | Canola | nucleus | 18.99 | 11.41 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078EW56 | EnsemblPlants:CDY05192 | ProteinID:CDY05192 | ProteinID:CDY05192.1 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00119998001 | InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 |
| PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | SMART:SM00521 | UniParc:UPI0004EECA17 | SEG:seg |
Description
BnaC05g46110D
Coordinates
chrLK031960:-:261203..261975
Molecular Weight (calculated)
20296.1 Da
IEP (calculated)
9.838
GRAVY (calculated)
-0.777
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPPCLEFGF SQPQMYTKYP CVEEEYYGVV VSAYGSQSRV MLPLNMETED GTIYVNSKQY HGIIRRRQSR AKAASVLHHN KLSSRGRKPY MHHSRHLHAL
101: RRPRGSGGRF LNTKSQKADD TKQTQSQPQK SNSQNSEVIH PEGQIMNLSH GLNVSVSEVT SMNYFLTAAM DNGCLDFNT
101: RRPRGSGGRF LNTKSQKADD TKQTQSQPQK SNSQNSEVIH PEGQIMNLSH GLNVSVSEVT SMNYFLTAAM DNGCLDFNT
001: MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
Arabidopsis Description
UNE8Nuclear factor Y, subunit A2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSX7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.