Factsheet for Os12t0618600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G028500.1	Wheat	nucleus	73.31	67.26
TraesCS5D01G037800.1	Wheat	nucleus	73.63	66.96
TraesCS5A01G029900.1	Wheat	nucleus	72.99	66.57
HORVU5Hr1G007890.1	Barley	nucleus	71.38	65.1
Zm00001d031092_P001	Maize	nucleus	64.31	60.61
Os03t0647600-01	Rice	nucleus	58.52	51.41
OQU79642	Sorghum	plastid	65.27	48.45
Solyc10g081840.1.1	Tomato	nucleus	19.94	40.26
CDY05192	Canola	nucleus	21.86	37.99
VIT_08s0032g01190.t01	Wine grape	nucleus	38.91	36.89
KRH72156	Soybean	nucleus	38.91	36.12
AT5G06510.2	Thale cress	nucleus	31.19	36.06
KRH68018	Soybean	nucleus	37.94	35.98
PGSC0003DMT400072322	Potato	nucleus	22.51	35.71
KRH32866	Soybean	nucleus	36.33	34.56
Os07t0158500-00	Rice	nucleus	41.48	34.04
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	37.62	33.81
Solyc01g006930.2.1	Tomato	nucleus	32.8	32.8
Os03t0174900-01	Rice	vacuole	21.86	32.54
PGSC0003DMT400055061	Potato	nucleus	32.48	32.48
CDY14662	Canola	nucleus	28.94	32.03
CDX74133	Canola	nucleus	28.94	32.03
Bra001164.1-P	Field mustard	nucleus	28.62	31.67
Bra009200.1-P	Field mustard	nucleus	27.01	31.46
CDX70098	Canola	nucleus	27.01	31.46
CDY18809	Canola	nucleus	27.33	31.02
CDX98930	Canola	nucleus	26.05	30.34
Bra040529.1-P	Field mustard	nucleus	27.33	30.25
Os08t0196700-01	Rice	nucleus	18.33	29.53
Os03t0696300-01	Rice	nucleus	23.47	28.08
AT3G05690.2	Thale cress	mitochondrion	29.58	27.71
Os12t0613000-01	Rice	nucleus	18.97	27.19
Os10t0397900-00	Rice	nucleus	14.15	26.51
Os02t0776400-01	Rice	nucleus	21.54	24.81
Os07t0608200-01	Rice	nucleus	24.12	24.67
Os03t0411100-01	Rice	nucleus	25.08	24.61

Protein Annotations

MapMan:15.5.51.1	EntrezGene:4352811	EMBL:AB288032	ProteinID:ABA99882.1	EMBL:AK073742	ProteinID:BAF30312.1
ProteinID:BAT18123.1	ProteinID:EEE53621.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001289	InterPro:NFYA
EnsemblPlantsGene:Os12g0618600	EnsemblPlants:Os12t0618600-01	PFAM:PF02045	PRINTS:PR00616	PFscan:PS51152	PANTHER:PTHR12632
PANTHER:PTHR12632:SF17	UniProt:Q2QM38	SMART:SM00521	UniParc:UPI0000680C0B	RefSeq:XP_015618449.1	RefSeq:XP_015618450.1
SEG:seg	:	:	:	:	:

Description

HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Transcriptional activator HAP2. (Os12t0618600-01)

Coordinates

chr12:-:26346896..26351207

Molecular Weight (calculated)

33665.1 Da

IEP (calculated)

8.479

GRAVY (calculated)

-0.426

Length

311 amino acids

Sequence
(BLAST)

001: MMSFNKSQEG FGQVAAVATL ASNGGGSLPW LLYGEPLGQG KPAMSPEGVV PRAQTPLDPP QVPAMDRGVP EILNFSMVPG KGEKCSEHST TIALQSPFAE
101: YNGCFELGLG QSVVPSNYPY ADQHYGLLSP YGVRPTPSGR ILIPPNMPAD APIYVNAKQC SAIIRRRHAR AKAERENRLV KARKPYLHES RHLHAMRRAR
201: GSGGRFLNTK KETNGKTTGG GRKVMDIIIP PLCPAASPSS EQCNPSSVSS LSGSEVSSIY EHEDMDHFHS FDHLRTHFFT PLPSLMDVEH GAGNPFKWTA
301: ASDGCCDLLK A

Best Arabidopsis Sequence Match ( AT5G06510.1 )
(BLAST)

001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI

Arabidopsis Description

NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.