Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G010230.1 | Barley | nucleus | 58.53 | 79.87 |
| EES17387 | Sorghum | nucleus | 78.34 | 79.81 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 73.27 | 75.71 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 73.27 | 75.36 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 70.97 | 74.4 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 73.27 | 74.3 |
| Zm00001d041491_P001 | Maize | nucleus | 74.19 | 55.71 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 47.0 | 49.04 |
| PGSC0003DMT400030813 | Potato | nucleus | 41.94 | 45.05 |
| PGSC0003DMT400054416 | Potato | nucleus | 42.86 | 44.29 |
| Solyc02g069860.2.1 | Tomato | nucleus | 42.4 | 44.23 |
| KRH11777 | Soybean | nucleus | 41.01 | 43.41 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 45.16 | 42.98 |
| KRH42997 | Soybean | nucleus | 40.09 | 42.23 |
| AT1G30500.2 | Thale cress | nucleus | 36.41 | 41.58 |
| Os08t0196700-01 | Rice | nucleus | 36.87 | 41.45 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 43.78 | 40.6 |
| CDY02298 | Canola | nucleus | 34.1 | 40.44 |
| Bra032395.1-P | Field mustard | nucleus | 34.1 | 40.44 |
| KRH36784 | Soybean | nucleus | 40.55 | 40.18 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 43.32 | 40.17 |
| CDY09571 | Canola | nucleus | 33.64 | 39.89 |
| KRH59113 | Soybean | nucleus | 38.71 | 38.71 |
| CDX84285 | Canola | nucleus | 34.1 | 37.76 |
| Bra005397.1-P | Field mustard | nucleus | 34.1 | 37.56 |
| CDY31636 | Canola | nucleus | 34.1 | 37.56 |
| AT2G34720.1 | Thale cress | nucleus | 34.1 | 37.37 |
| Os03t0174900-01 | Rice | vacuole | 34.56 | 35.89 |
| Os03t0696300-01 | Rice | nucleus | 35.94 | 30.0 |
| Os10t0397900-00 | Rice | nucleus | 18.89 | 24.7 |
| Os02t0776400-01 | Rice | nucleus | 29.49 | 23.7 |
| Os07t0608200-01 | Rice | nucleus | 31.8 | 22.7 |
| Os03t0411100-01 | Rice | nucleus | 31.8 | 21.77 |
| Os12t0618600-01 | Rice | nucleus | 27.19 | 18.97 |
| Os03t0647600-01 | Rice | nucleus | 29.95 | 18.36 |
| Os07t0158500-00 | Rice | nucleus | 24.88 | 14.25 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:4352778 | EMBL:AB288028 | ProteinID:ABA99389.2 | EMBL:AK065163 | ProteinID:BAF30280.1 |
| ProteinID:BAT18056.1 | InterPro:CCAAT-binding_factor_CS | ProteinID:EAZ21202.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016602 | EMBL:HQ839673 | InterPro:IPR001289 | InterPro:NFYA | EnsemblPlantsGene:Os12g0613000 | EnsemblPlants:Os12t0613000-01 |
| PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF18 |
| UniProt:Q2QM93 | SMART:SM00521 | UniParc:UPI0000680C41 | RefSeq:XP_015618405.1 | SEG:seg | : |
Description
HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to NF-YA subunit. (Os12t0613000-01)
Coordinates
chr12:-:25953474..25957331
Molecular Weight (calculated)
23722.4 Da
IEP (calculated)
9.558
GRAVY (calculated)
-1.101
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVVHDVSG NHGADERQKQ QRQGEPEDQQ EASVTSTDSH TMVATPSTDY ATPYAHHDMA HAMGQIAYAN IDPYYGSLYA AYGGQPMMHP PLVGMHPAGL
101: PLPTDAIEEP VYVNAKQYNA ILRRRQSRAK AESEKKLVKG RKPYLHESRH QHALKRARGA GGRFLNSKSD DKEEHSDSSS RDKQDGVAPR DSGQPSTSPS
201: SKGASSAKQN KKSKTSN
101: PLPTDAIEEP VYVNAKQYNA ILRRRQSRAK AESEKKLVKG RKPYLHESRH QHALKRARGA GGRFLNSKSD DKEEHSDSSS RDKQDGVAPR DSGQPSTSPS
201: SKGASSAKQN KKSKTSN
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.