Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G375500.1 | Wheat | nucleus | 62.71 | 68.73 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 62.71 | 68.31 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 61.58 | 66.87 |
| Zm00001d033215_P001 | Maize | nucleus | 57.63 | 63.35 |
| KXG37939 | Sorghum | nucleus | 59.04 | 60.58 |
| Os12t0618600-01 | Rice | nucleus | 51.41 | 58.52 |
| Zm00001d013676_P002 | Maize | nucleus | 55.93 | 58.06 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 62.71 | 56.92 |
| Solyc10g081840.1.1 | Tomato | nucleus | 17.8 | 40.91 |
| CDY05192 | Canola | nucleus | 19.21 | 37.99 |
| PGSC0003DMT400072322 | Potato | nucleus | 20.62 | 37.24 |
| Os07t0158500-00 | Rice | nucleus | 39.55 | 36.94 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 34.18 | 36.89 |
| PGSC0003DMT400055061 | Potato | nucleus | 29.94 | 34.08 |
| KRH68018 | Soybean | nucleus | 31.36 | 33.84 |
| AT5G06510.2 | Thale cress | nucleus | 25.71 | 33.83 |
| Solyc01g006930.2.1 | Tomato | nucleus | 29.38 | 33.44 |
| KRH72156 | Soybean | nucleus | 31.64 | 33.43 |
| KRH32866 | Soybean | nucleus | 30.51 | 33.03 |
| Os03t0174900-01 | Rice | vacuole | 19.21 | 32.54 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 31.64 | 32.37 |
| CDY18809 | Canola | nucleus | 24.86 | 32.12 |
| CDX70098 | Canola | nucleus | 24.01 | 31.84 |
| Bra009200.1-P | Field mustard | nucleus | 24.01 | 31.84 |
| CDY14662 | Canola | nucleus | 25.14 | 31.67 |
| Bra001164.1-P | Field mustard | nucleus | 25.14 | 31.67 |
| CDX74133 | Canola | nucleus | 25.14 | 31.67 |
| Bra040529.1-P | Field mustard | nucleus | 24.86 | 31.32 |
| CDX98930 | Canola | nucleus | 23.16 | 30.71 |
| Os08t0196700-01 | Rice | nucleus | 16.67 | 30.57 |
| Os03t0696300-01 | Rice | nucleus | 22.32 | 30.38 |
| Os12t0613000-01 | Rice | nucleus | 18.36 | 29.95 |
| AT3G05690.2 | Thale cress | mitochondrion | 25.99 | 27.71 |
| Os10t0397900-00 | Rice | nucleus | 12.99 | 27.71 |
| Os07t0608200-01 | Rice | nucleus | 23.73 | 27.63 |
| Os02t0776400-01 | Rice | nucleus | 19.49 | 25.56 |
| Os03t0411100-01 | Rice | nucleus | 21.47 | 23.97 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:4333575 | ProteinID:AAU89195.1 | EMBL:AB288034 | ProteinID:ABF97890.1 | EMBL:AK106398 |
| ProteinID:BAF12688.1 | ProteinID:BAS85486.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | InterPro:NFYA |
| EnsemblPlantsGene:Os03g0647600 | EnsemblPlants:Os03t0647600-01 | PFAM:PF02045 | PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF17 | UniProt:Q60DJ8 | SMART:SM00521 | UniParc:UPI0000444488 | RefSeq:XP_015628114.1 | SEG:seg |
Description
HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Nf-Y-A subunit. (Os03t0647600-01)
Coordinates
chr3:-:25069214..25074703
Molecular Weight (calculated)
37412.0 Da
IEP (calculated)
8.910
GRAVY (calculated)
-0.526
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSFKQSHEG FGHVAAAGAG PQQQQQPWWA GSQLLYGEAS PEEAALRDGG QFQVVPGGRA ALDPAAPEPE KTAVPAMPKR GGGGGAPEVL KFSVFSGNLE
101: PGDTGEKNRE HSATIAMQSP LPEYNGHFEL GLGQSMVSPN YPCIDQCYGL MTTYAMKSMS GGRMLLPLNA PADAPIYVNA KQYEGILRRR RARAKAQREN
201: RLVKGRKPYL HESRHRHAMR RARGSGGRFL NTKKEATAAG CGGSSKTPLA SLVSPADVAH RPGSGGRASS LSGSDVSSPG GVMYDHHRHD DADAADHYNS
301: IDHHLRTPFF TPLPIIMDSG GGGGDHASHS AAAVAAPFRW ATAAGDGCCE LLKA
101: PGDTGEKNRE HSATIAMQSP LPEYNGHFEL GLGQSMVSPN YPCIDQCYGL MTTYAMKSMS GGRMLLPLNA PADAPIYVNA KQYEGILRRR RARAKAQREN
201: RLVKGRKPYL HESRHRHAMR RARGSGGRFL NTKKEATAAG CGGSSKTPLA SLVSPADVAH RPGSGGRASS LSGSDVSSPG GVMYDHHRHD DADAADHYNS
301: IDHHLRTPFF TPLPIIMDSG GGGGDHASHS AAAVAAPFRW ATAAGDGCCE LLKA
001: MQMFEGDFIY AVIDLGGEKS SRDVPKPHVA FAMQSACFEF GFAQPMMYTK HPHVEQYYGV VSAYGSQRSS GRVMIPLKME TEEDGTIYVN SKQYHGIIRR
101: RQSRAKAEKL SRCRKPYMHH SRHLHAMRRP RGSGGRFLNT KTADAAKQSK PSNSQSSEVF HPENETINSS REANESNLSD SAVTSMDYFL SSSAYSPGGM
201: VMPIKWNAAA MDIGCCKLNI
101: RQSRAKAEKL SRCRKPYMHH SRHLHAMRRP RGSGGRFLNT KTADAAKQSK PSNSQSSEVF HPENETINSS REANESNLSD SAVTSMDYFL SSSAYSPGGM
201: VMPIKWNAAA MDIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.