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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g006930.2.1 Tomato nucleus 92.93 92.93
PGSC0003DMT400072322 Potato nucleus 37.3 59.18
KRH68018 Soybean nucleus 50.8 48.17
VIT_08s0032g01190.t01 Wine grape nucleus 50.48 47.87
KRH72156 Soybean nucleus 49.52 45.97
GSMUA_Achr7P07860_001 Banana nucleus 29.26 45.27
KRG96274 Soybean endoplasmic reticulum, extracellular, vacuole 48.87 43.93
KRH32866 Soybean nucleus 45.66 43.43
CDY05192 Canola nucleus 24.44 42.46
AT5G06510.2 Thale cress nucleus 33.76 39.03
CDY18809 Canola nucleus 34.08 38.69
Bra040529.1-P Field mustard nucleus 34.08 37.72
CDX98930 Canola nucleus 32.15 37.45
CDX70098 Canola nucleus 31.19 36.33
Bra009200.1-P Field mustard nucleus 31.19 36.33
CDY14662 Canola nucleus 32.48 35.94
CDX74133 Canola nucleus 32.48 35.94
Bra001164.1-P Field mustard nucleus 32.48 35.94
HORVU5Hr1G007890.1 Barley nucleus 36.98 33.72
TraesCS5B01G028500.1 Wheat nucleus 36.66 33.63
GSMUA_Achr4P31420_001 Banana mitochondrion, nucleus 36.33 33.53
TraesCS5B01G375500.1 Wheat nucleus 34.73 33.44
TraesCS5A01G373500.1 Wheat nucleus 35.05 33.44
TraesCS5D01G383000.1 Wheat nucleus 34.73 33.23
TraesCS5A01G029900.1 Wheat nucleus 36.33 33.14
TraesCS5D01G037800.1 Wheat nucleus 36.33 33.04
GSMUA_Achr4P28390_001 Banana nucleus 34.08 32.92
AT3G05690.2 Thale cress mitochondrion 35.05 32.83
Os12t0618600-01 Rice nucleus 32.48 32.48
Zm00001d033215_P001 Maize nucleus 33.44 32.3
Zm00001d031092_P001 Maize nucleus 33.12 31.21
KXG37939 Sorghum nucleus 34.08 30.72
PGSC0003DMT400054416 Potato nucleus 20.58 30.48
Zm00001d013676_P002 Maize nucleus 33.12 30.21
PGSC0003DMT400030813 Potato nucleus 19.61 30.2
Os03t0647600-01 Rice nucleus 34.08 29.94
GSMUA_Achr5P02590_001 Banana nucleus 30.87 29.63
HORVU5Hr1G092700.5 Barley nucleus 34.41 27.44
PGSC0003DMT400055982 Potato nucleus 18.65 26.85
Zm00001d007882_P001 Maize nucleus 24.12 25.51
PGSC0003DMT400021053 Potato nucleus 19.61 25.42
Os07t0158500-00 Rice nucleus 30.87 25.33
OQU79642 Sorghum plastid 34.08 25.3
PGSC0003DMT400017698 Potato nucleus 24.12 24.75
OQU88458 Sorghum nucleus 24.12 23.22
PGSC0003DMT400006358 Potato nucleus 20.58 22.61
PGSC0003DMT400027785 Potato nucleus 21.86 21.94
PGSC0003DMT400018959 Potato nucleus 20.9 21.67
PGSC0003DMT400000740 Potato nucleus 17.68 18.27
Protein Annotations
EntrezGene:102599915MapMan:15.5.51.1GO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR001289UniProt:M1BXA5
InterPro:NFYAPFAM:PF02045EnsemblPlantsGene:PGSC0003DMG400021365PGSC:PGSC0003DMG400021365EnsemblPlants:PGSC0003DMT400055061PRINTS:PR00616
PFscan:PS51152PANTHER:PTHR12632PANTHER:PTHR12632:SF7SMART:SM00521UniParc:UPI000295F8EERefSeq:XP_006348448.1
SEG:seg:::::
Description
YA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400021365]
Coordinates
chr1:+:2798848..2803545
Molecular Weight (calculated)
33972.4 Da
IEP (calculated)
10.096
GRAVY (calculated)
-0.490
Length
311 amino acids
Sequence
(BLAST)
001: MHTTVFSKGN EGVVQNQSVA TLCTAPWWSS GFMSQSVAFA EPFGQLKSAS VEQQPKGNAT EFTISSGDCK SSANGQKLSN VQAATSVRAA NMDYRGHFDL
101: GFGQSLISAK YPYGEQCIGL FSAYAPQLSG RIMLPLNLAS DEGPIFVNAK QYHGILRRRK TRAKEMEKKA LKPRKPYLHL SRHLHALRRP RGCGGRFLNT
201: RNMNGTMKGG KNPDMFKTGD VQNFYPTGSQ NSEVLQSDSS NLSSPKETSG SRFFDSSGVT NMYSSGNLDP LLFQNLRPPV QAIPDMMNTG HGIFMSGKWV
301: GTADSCCNLK V
Best Arabidopsis Sequence Match ( AT5G06510.1 )
(BLAST)
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.