Factsheet for HORVU5Hr1G007890.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G028500.1	Wheat	nucleus	93.26	93.81
TraesCS5D01G037800.1	Wheat	nucleus	93.84	93.57
TraesCS5A01G029900.1	Wheat	nucleus	93.55	93.55
Os12t0618600-01	Rice	nucleus	65.1	71.38
Zm00001d031092_P001	Maize	nucleus	61.0	63.03
HORVU5Hr1G092700.5	Barley	nucleus	60.12	52.56
OQU79642	Sorghum	plastid	63.05	51.31
Solyc10g081840.1.1	Tomato	nucleus	19.65	43.51
PGSC0003DMT400072322	Potato	nucleus	22.29	38.78
CDY05192	Canola	nucleus	20.23	38.55
KRH72156	Soybean	nucleus	37.54	38.21
VIT_08s0032g01190.t01	Wine grape	nucleus	36.66	38.11
KRH68018	Soybean	nucleus	36.07	37.5
PGSC0003DMT400055061	Potato	nucleus	33.72	36.98
KRH32866	Soybean	nucleus	35.19	36.7
AT5G06510.2	Thale cress	nucleus	28.74	36.43
Solyc01g006930.2.1	Tomato	nucleus	33.14	36.33
HORVU0Hr1G010230.1	Barley	nucleus	16.42	35.22
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	35.48	34.97
CDY18809	Canola	nucleus	27.27	33.94
CDX70098	Canola	nucleus	26.39	33.71
Bra009200.1-P	Field mustard	nucleus	26.39	33.71
Bra001164.1-P	Field mustard	nucleus	27.57	33.45
Bra040529.1-P	Field mustard	nucleus	27.27	33.1
CDY14662	Canola	nucleus	26.98	32.74
CDX74133	Canola	nucleus	26.98	32.74
CDX98930	Canola	nucleus	25.22	32.21
AT3G05690.2	Thale cress	mitochondrion	29.91	30.72
HORVU5Hr1G010600.10	Barley	nucleus	17.3	27.57
HORVU6Hr1G081080.12	Barley	nucleus	21.7	26.33
HORVU4Hr1G075830.4	Barley	nucleus	21.41	25.17
HORVU2Hr1G032130.4	Barley	nucleus	21.41	24.33

Protein Annotations

MapMan:15.5.51.1	EMBL:AK377024	InterPro:CCAAT-binding_factor_CS	UniProt:F2ELJ6	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016602	EnsemblPlantsGene:HORVU5Hr1G007890	EnsemblPlants:HORVU5Hr1G007890.1	InterPro:IPR001289	InterPro:NFYA
PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF17
SMART:SM00521	UniParc:UPI000200902F	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2ELJ6]

Coordinates

chrchr5H:-:16694376..16698828

Molecular Weight (calculated)

37067.7 Da

IEP (calculated)

8.737

GRAVY (calculated)

-0.563

Length

341 amino acids

Sequence
(BLAST)

001: MMSFKNHHEG FTGQHLVAAA AASQASGGAP LPWWVGSQLL YGEPMGHGKA PPAVPVSMSP PQDACRDGQF QVVPRGGQPL LDAVPLPPQP MPERGIPEAL
101: KFSMAHGKGG NSSEHSAPIT LQSPFTEYND HFELGLGQSV ISSSYYSDQQ YGLLSSYAMR SAYSGRMLIP LNMPADAPVY VNAKQYEGIL RRRRARAKAE
201: KENRLVKARK PYLHESRHLH AMRRARGSGG RFLNTKKETN GKDTGVGSTA MGGNQFMRPT ASLSSEIQHS EQGNPSSVSS LSGSEVTSLY DHEDVDHYHN
301: FEHLRTHFFT PLPSIMDGEH GAGNPFKWAA ASDGCCNLLK A

Best Arabidopsis Sequence Match ( AT5G06510.3 )
(BLAST)

001: MQMFEGDFIY AVIDLGGEKS SRDVPKPHVA FAMQSACFEF GFAQPMMYTK HPHVEQYYGV VSAYGSQRSS GRVMIPLKME TEEDGTIYVN SKQYHGIIRR
101: RQSRAKAEKL SRCRKPYMHH SRHLHAMRRP RGSGGRFLNT KTADAAKQSK PSNSQSSEVF HPENETINSS REANESNLSD SAVTSMDYFL SSSAYSPGGM
201: VMPIKWNAAA MDIGCCKLNI

Arabidopsis Description

NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.