Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G290400.1 | Wheat | nucleus | 82.41 | 97.95 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 81.38 | 97.52 |
| EER92762 | Sorghum | nucleus | 64.48 | 75.4 |
| Os03t0174900-01 | Rice | vacuole | 51.38 | 71.29 |
| Zm00001d027874_P004 | Maize | nucleus | 53.1 | 58.56 |
| HORVU0Hr1G010230.1 | Barley | nucleus | 26.9 | 49.06 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 43.1 | 43.4 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 28.97 | 39.25 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 39.31 | 39.18 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 40.0 | 38.67 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 41.03 | 37.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.34 | 37.5 |
| KRH02649 | Soybean | nucleus | 26.21 | 35.68 |
| KRH19255 | Soybean | nucleus | 27.93 | 34.76 |
| Bra014368.1-P | Field mustard | nucleus | 27.59 | 34.63 |
| CDY69800 | Canola | nucleus | 27.59 | 34.63 |
| PGSC0003DMT400055982 | Potato | nucleus | 25.52 | 34.26 |
| CDY26138 | Canola | nucleus | 27.59 | 34.04 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 32.76 | 33.81 |
| KRH12475 | Soybean | nucleus | 26.55 | 33.77 |
| Bra037968.1-P | Field mustard | nucleus | 29.66 | 33.73 |
| CDY02477 | Canola | nucleus | 26.21 | 33.33 |
| CDY56623 | Canola | nucleus | 26.9 | 33.33 |
| KRH37469 | Soybean | nucleus | 25.86 | 32.89 |
| Bra030899.1-P | Field mustard | nucleus | 27.24 | 31.47 |
| Bra030996.1-P | Field mustard | mitochondrion | 22.76 | 31.28 |
| CDY51397 | Canola | nucleus | 30.0 | 30.53 |
| CDY48025 | Canola | nucleus | 30.0 | 29.9 |
| Bra008052.1-P | Field mustard | nucleus | 30.0 | 29.9 |
| KRH10071 | Soybean | nucleus | 30.34 | 29.63 |
| Solyc08g062210.2.1 | Tomato | nucleus | 32.76 | 29.23 |
| CDY33084 | Canola | nucleus | 30.0 | 29.1 |
| AT1G54160.1 | Thale cress | nucleus | 30.69 | 28.9 |
| CDY39091 | Canola | nucleus | 30.34 | 28.57 |
| Bra021527.1-P | Field mustard | nucleus | 30.34 | 28.57 |
| Bra016031.1-P | Field mustard | nucleus | 31.38 | 28.26 |
| CDX96435 | Canola | nucleus | 31.38 | 28.26 |
| AT3G14020.1 | Thale cress | nucleus | 29.66 | 27.92 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 23.1 | 27.92 |
| KRH06120 | Soybean | nucleus | 30.69 | 27.9 |
| CDY33253 | Canola | nucleus | 29.31 | 27.6 |
| CDX82133 | Canola | nucleus | 30.34 | 27.59 |
| KRH47551 | Soybean | nucleus | 32.07 | 26.72 |
| CDY21741 | Canola | nucleus | 29.66 | 26.71 |
| CDX72950 | Canola | nucleus | 31.03 | 26.24 |
| AT1G17590.3 | Thale cress | nucleus | 29.31 | 25.91 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 35.52 | 25.56 |
| AT1G72830.2 | Thale cress | nucleus | 30.0 | 25.51 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 28.28 | 24.4 |
| CDY70458 | Canola | nucleus | 33.1 | 23.7 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 25.17 | 21.41 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 26.55 | 19.74 |
| CDX81837 | Canola | nucleus | 20.0 | 19.46 |
| CDY30854 | Canola | nucleus | 8.62 | 17.12 |
Protein Annotations
| MapMan:15.5.51.1 | UniProt:A0A287PQ25 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016602 | EnsemblPlantsGene:HORVU4Hr1G075830 | EnsemblPlants:HORVU4Hr1G075830.4 | InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 |
| PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF16 | SMART:SM00521 |
| UniParc:UPI000B47FF0F | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:599327367..599330732
Molecular Weight (calculated)
32054.5 Da
IEP (calculated)
10.054
GRAVY (calculated)
-0.989
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: CRGGEGRERE RRSKLRRREE GSPERGHAPF TSHISQLELK ARVEAHEMRR KQNMHENGTI MIQFGQQVPN YESSASDSPR EVSGMSEGSF NEQNDQSGNR
101: DGYTKSDEGK MMSALSLGNS ETAYTPPKPD RTHPFAISYP YADPYYGGAV AAYGTHAIMH PQMVGMVPSS RVPLPIEPAA AEEPIYVNAK QYHAILRRRQ
201: LRAKLEAENK LVKSRKPYLH ESRHQHAMKR ARGTGGRFLN AKEKSEAASG GGNASARSGH ASVPADGGMF SKHDHTLPSG DFHYRARGGA
101: DGYTKSDEGK MMSALSLGNS ETAYTPPKPD RTHPFAISYP YADPYYGGAV AAYGTHAIMH PQMVGMVPSS RVPLPIEPAA AEEPIYVNAK QYHAILRRRQ
201: LRAKLEAENK LVKSRKPYLH ESRHQHAMKR ARGTGGRFLN AKEKSEAASG GGNASARSGH ASVPADGGMF SKHDHTLPSG DFHYRARGGA
001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
Arabidopsis Description
NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.