Factsheet for Bra030996.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029489_P002	Maize	nucleus	22.27	52.22
AT1G17590.3	Thale cress	nucleus	56.4	36.28
Bra008052.1-P	Field mustard	nucleus	46.45	33.68
CDX81837	Canola	nucleus	47.39	33.56
Bra016031.1-P	Field mustard	nucleus	50.71	33.23
Os03t0174900-01	Rice	vacuole	28.91	29.19
Bra014368.1-P	Field mustard	nucleus	31.28	28.57
Bra032395.1-P	Field mustard	nucleus	24.64	28.42
TraesCS4D01G289600.1	Wheat	nucleus	30.81	26.86
TraesCS4B01G290400.1	Wheat	nucleus	30.81	26.64
TraesCS6A01G335400.1	Wheat	nucleus	30.81	25.59
TraesCS6D01G315300.1	Wheat	nucleus	30.81	25.59
TraesCS6B01G366100.2	Wheat	nucleus	30.81	25.49
Bra037968.1-P	Field mustard	nucleus	30.81	25.49
EER92762	Sorghum	nucleus	29.86	25.4
Bra005397.1-P	Field mustard	nucleus	23.22	24.87
Bra030899.1-P	Field mustard	nucleus	29.38	24.7
Solyc03g121940.2.1	Tomato	nucleus	27.96	24.48
Bra023913.1-P	Field mustard	nucleus	20.85	24.44
GSMUA_Achr8P16700_001	Banana	nucleus	32.23	23.61
HORVU6Hr1G081080.12	Barley	nucleus	31.28	23.49
GSMUA_Achr8P30700_001	Banana	nucleus	34.6	23.03
Os02t0776400-01	Rice	nucleus	29.38	22.96
HORVU4Hr1G075830.4	Barley	nucleus	31.28	22.76
GSMUA_AchrUn_...	Banana	nucleus	33.65	22.76
HORVU2Hr1G032130.4	Barley	nucleus	32.23	22.67
KRH06120	Soybean	nucleus	34.12	22.57
Os07t0608200-01	Rice	nucleus	32.23	22.37
GSMUA_Achr2P21730_001	Banana	nucleus	30.81	22.34
KRH47551	Soybean	nucleus	36.02	21.84
EER94699	Sorghum	nucleus	31.75	21.68
TraesCS2B01G198700.1	Wheat	nucleus	30.81	21.67
EER99688	Sorghum	nucleus	30.81	21.59
Zm00001d022109_P003	Maize	nucleus	30.81	21.59
PGSC0003DMT400006358	Potato	nucleus	28.91	21.55
KRH10071	Soybean	nucleus	29.86	21.21
Zm00001d027874_P004	Maize	nucleus	26.07	20.91
Os03t0411100-01	Rice	nucleus	31.28	20.82
TraesCS2A01G172500.1	Wheat	nucleus	29.86	20.79
Zm00001d018255_P001	Maize	endoplasmic reticulum, extracellular, golgi	28.44	20.48
Bra023378.1-P	Field mustard	nucleus	23.22	20.42
OQU85816	Sorghum	nucleus	29.38	20.39
Zm00001d006835_P002	Maize	nucleus	28.91	20.33
Bra021527.1-P	Field mustard	nucleus	28.91	19.81
TraesCS2D01G179600.2	Wheat	nucleus	30.81	19.4
Bra006165.1-P	Field mustard	nucleus	23.22	19.29
Bra040529.1-P	Field mustard	nucleus	25.59	19.22
Bra001164.1-P	Field mustard	nucleus	25.59	19.22
VIT_09s0002g01590.t01	Wine grape	nucleus	29.38	18.45
Bra031242.1-P	Field mustard	nucleus	25.59	18.31
Bra009200.1-P	Field mustard	nucleus	22.75	17.98
Bra001806.1-P	Field mustard	nucleus	24.64	16.88
Bra008878.1-P	Field mustard	nucleus	21.8	16.25
Zm00001d026305_P002	Maize	nucleus	22.75	10.62

Protein Annotations

EnsemblPlants:Bra030996.1	EnsemblPlants:Bra030996.1-P	EnsemblPlantsGene:Bra030996	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001289
InterPro:NFYA	PANTHER:PTHR12632	PANTHER:PTHR12632:SF8	PFAM:PF02045	PFscan:PS51152	PRINTS:PR00616
SMART:SM00521	UniParc:UPI0002542B4E	UniProt:M4EQC5	MapMan:15.5.51.1	:	:

Description

AT1G17590 (E=1e-051) NF-YA8 | NF-YA8 (NUCLEAR FACTOR Y, SUBUNIT A8); transcription factor

Coordinates

chrA09:+:33017638..33021495

Molecular Weight (calculated)

24230.4 Da

IEP (calculated)

10.548

GRAVY (calculated)

-0.406

Length

211 amino acids

Sequence
(BLAST)

001: MKLVRHPCVV HLYQGAQIFT SSWSIIHVVI DVCRGFEETQ RKVIPNNIRS GSSHTTRISD IHFAPGKANF FFPCADPHFG GYLPHATVWN PQMVGRVPLP
101: LDLIEDEPVF VNVKQFHAIM RRREQRAKLE TQNKLIKARK LYLHESRHVH ALKRPRGSGA RFLPKSFKNL ESQNMTCQSN KKTPRETCMD SWLISCRSAT
201: TLVVQPHLDP T

Best Arabidopsis Sequence Match ( AT1G17590.3 )
(BLAST)

001: MDKKVSFTSS VAHSTPPYLS TSISWGLPTK SNGVTESLSL KVVDARPERL INTKNISFQD QDSSSTLSSA QSSNDVTSSG DDNPSRQISF LAHSDVCKGF
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI

Arabidopsis Description

NFYA8Uncharacterized protein At1g17590 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.