Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G198700.1 | Wheat | nucleus | 84.48 | 94.33 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 83.28 | 92.08 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 80.6 | 90.0 |
| Os07t0608200-01 | Rice | nucleus | 57.01 | 62.83 |
| Zm00001d022109_P003 | Maize | nucleus | 51.04 | 56.81 |
| Zm00001d006835_P002 | Maize | nucleus | 50.15 | 56.0 |
| EER99688 | Sorghum | nucleus | 49.55 | 55.15 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 34.03 | 47.11 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 39.4 | 45.83 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 39.1 | 45.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.3 | 43.27 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 39.7 | 41.96 |
| CDY69800 | Canola | nucleus | 26.57 | 38.53 |
| CDY26138 | Canola | nucleus | 26.87 | 38.3 |
| Bra014368.1-P | Field mustard | nucleus | 26.27 | 38.1 |
| KRH37469 | Soybean | nucleus | 25.37 | 37.28 |
| KRH12475 | Soybean | nucleus | 25.07 | 36.84 |
| KRH19255 | Soybean | nucleus | 25.37 | 36.48 |
| CDY02477 | Canola | nucleus | 24.48 | 35.96 |
| Bra037968.1-P | Field mustard | nucleus | 27.16 | 35.69 |
| KRH02649 | Soybean | nucleus | 22.69 | 35.68 |
| CDY56623 | Canola | nucleus | 24.48 | 35.04 |
| PGSC0003DMT400055982 | Potato | nucleus | 22.39 | 34.72 |
| Bra030899.1-P | Field mustard | nucleus | 25.67 | 34.26 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 25.97 | 34.25 |
| CDY48025 | Canola | nucleus | 29.25 | 33.68 |
| Bra008052.1-P | Field mustard | nucleus | 29.25 | 33.68 |
| CDY51397 | Canola | nucleus | 27.76 | 32.63 |
| CDY33084 | Canola | nucleus | 27.76 | 31.1 |
| CDX82133 | Canola | nucleus | 29.55 | 31.03 |
| Bra030996.1-P | Field mustard | mitochondrion | 19.4 | 30.81 |
| AT1G54160.1 | Thale cress | nucleus | 28.06 | 30.52 |
| Solyc08g062210.2.1 | Tomato | nucleus | 29.55 | 30.46 |
| Bra016031.1-P | Field mustard | nucleus | 28.96 | 30.12 |
| KRH47551 | Soybean | nucleus | 31.04 | 29.89 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 18.81 | 29.86 |
| CDX96435 | Canola | nucleus | 28.66 | 29.81 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 23.58 | 29.7 |
| AT1G72830.2 | Thale cress | nucleus | 30.15 | 29.62 |
| KRH06120 | Soybean | nucleus | 28.06 | 29.47 |
| AT1G17590.3 | Thale cress | nucleus | 28.66 | 29.27 |
| CDY39091 | Canola | nucleus | 26.87 | 29.22 |
| Bra021527.1-P | Field mustard | nucleus | 26.87 | 29.22 |
| Zm00001d026305_P002 | Maize | nucleus | 39.4 | 29.2 |
| CDY21741 | Canola | nucleus | 28.06 | 29.19 |
| KRH10071 | Soybean | nucleus | 25.67 | 28.96 |
| CDY33253 | Canola | nucleus | 26.57 | 28.9 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 20.6 | 28.75 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 28.66 | 28.57 |
| CDX72950 | Canola | nucleus | 28.96 | 28.28 |
| AT3G14020.1 | Thale cress | nucleus | 25.97 | 28.25 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 31.94 | 26.55 |
| CDY70458 | Canola | nucleus | 29.25 | 24.2 |
| CDX81837 | Canola | nucleus | 21.19 | 23.83 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 22.39 | 23.08 |
| CDY30854 | Canola | nucleus | 9.55 | 21.92 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 20.9 | 20.47 |
Protein Annotations
| MapMan:15.5.51.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 |
| InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF27 | SMART:SM00521 | EnsemblPlantsGene:TraesCS2D01G179600 | EnsemblPlants:TraesCS2D01G179600.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:+:123803804..123806148
Molecular Weight (calculated)
36697.6 Da
IEP (calculated)
10.063
GRAVY (calculated)
-0.586
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDHPGHPIS NYDFLSGNGC HTKKLVHKNY DQDSSSAKSG RSQQEASATS DSNLNEQHTS RPPSQSDNDN DHGKPDQHMI KPLLSLGNPE TVAPPPMIDC
101: SQSFAYVPYA ADAYAGIFPG YASHAIVHPQ LNAATNSRVP LPIEPAAEEP MFVNAKQYHA ILRRRQIRAK LEAQNKLVKA RKISATDLFG CLGNIQRTNL
201: IREYIFVLMM KTSGRGIFLP YLHESRHRHA MKRARGTGGR FLNTKQLEEQ KQVSGGASCT KVHGKNTLLQ GSPAFAPSAS APSNMSSFST TGMLANQERT
301: CFPLVGFRPT VSFSALNGNG KLAPNGMHQR ASMMR
101: SQSFAYVPYA ADAYAGIFPG YASHAIVHPQ LNAATNSRVP LPIEPAAEEP MFVNAKQYHA ILRRRQIRAK LEAQNKLVKA RKISATDLFG CLGNIQRTNL
201: IREYIFVLMM KTSGRGIFLP YLHESRHRHA MKRARGTGGR FLNTKQLEEQ KQVSGGASCT KVHGKNTLLQ GSPAFAPSAS APSNMSSFST TGMLANQERT
301: CFPLVGFRPT VSFSALNGNG KLAPNGMHQR ASMMR
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.