Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016031.1-P | Field mustard | nucleus | 98.76 | 98.76 |
| CDX72950 | Canola | nucleus | 93.17 | 87.46 |
| CDX82133 | Canola | nucleus | 83.23 | 84.01 |
| CDY48025 | Canola | nucleus | 74.22 | 82.13 |
| AT1G72830.2 | Thale cress | nucleus | 81.37 | 76.83 |
| CDY70458 | Canola | nucleus | 83.85 | 66.67 |
| CDY21741 | Canola | nucleus | 59.94 | 59.94 |
| Zm00001d029489_P002 | Maize | nucleus | 16.46 | 58.89 |
| CDX81837 | Canola | nucleus | 50.93 | 55.03 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 37.58 | 50.42 |
| CDY30854 | Canola | nucleus | 19.57 | 43.15 |
| CDY69800 | Canola | nucleus | 30.75 | 42.86 |
| CDY26138 | Canola | nucleus | 30.43 | 41.7 |
| CDY56623 | Canola | nucleus | 28.88 | 39.74 |
| CDY02477 | Canola | nucleus | 27.95 | 39.47 |
| KRH47551 | Soybean | nucleus | 42.55 | 39.37 |
| Os03t0174900-01 | Rice | vacuole | 25.16 | 38.76 |
| EER92762 | Sorghum | nucleus | 29.81 | 38.71 |
| Os07t0608200-01 | Rice | nucleus | 35.4 | 37.5 |
| KRH06120 | Soybean | nucleus | 36.96 | 37.3 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 28.26 | 37.3 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 27.95 | 37.19 |
| CDY51397 | Canola | nucleus | 32.61 | 36.84 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 32.61 | 36.46 |
| KRH10071 | Soybean | nucleus | 33.54 | 36.36 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 32.61 | 36.08 |
| CDY02298 | Canola | nucleus | 20.5 | 36.07 |
| CDY39091 | Canola | nucleus | 34.47 | 36.04 |
| CDY33084 | Canola | nucleus | 33.23 | 35.79 |
| CDY33253 | Canola | nucleus | 34.16 | 35.71 |
| CDY09571 | Canola | nucleus | 20.19 | 35.52 |
| EER99688 | Sorghum | nucleus | 31.68 | 33.89 |
| CDY05192 | Canola | nucleus | 18.63 | 33.52 |
| CDX78492 | Canola | nucleus | 21.12 | 33.17 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 30.75 | 33.0 |
| PGSC0003DMT400006358 | Potato | nucleus | 28.57 | 32.51 |
| CDY31636 | Canola | nucleus | 19.88 | 32.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.37 | 32.37 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 31.68 | 32.18 |
| CDX84285 | Canola | nucleus | 19.57 | 32.14 |
| EER94699 | Sorghum | nucleus | 30.75 | 32.04 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 30.12 | 32.01 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 29.81 | 32.0 |
| Zm00001d006835_P002 | Maize | nucleus | 29.81 | 32.0 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 33.23 | 31.85 |
| Zm00001d022109_P003 | Maize | nucleus | 29.5 | 31.56 |
| Solyc03g121940.2.1 | Tomato | nucleus | 23.6 | 31.54 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 28.26 | 31.38 |
| Zm00001d027874_P004 | Maize | nucleus | 25.47 | 31.18 |
| CDY37330 | Canola | nucleus | 17.39 | 31.11 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 24.53 | 30.98 |
| Os03t0411100-01 | Rice | nucleus | 30.43 | 30.91 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 24.22 | 30.71 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 23.91 | 30.32 |
| Os02t0776400-01 | Rice | nucleus | 24.53 | 29.26 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 29.81 | 28.66 |
| CDX91161 | Canola | nucleus | 19.25 | 28.31 |
| CDX85686 | Canola | nucleus | 20.5 | 27.97 |
| CDX82223 | Canola | nucleus | 23.29 | 26.79 |
| CDX70480 | Canola | nucleus | 21.12 | 26.25 |
| CDY53967 | Canola | nucleus | 22.98 | 26.06 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 22.67 | 25.98 |
| CDX97206 | Canola | nucleus | 22.98 | 25.96 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 23.6 | 25.94 |
| CDY32398 | Canola | nucleus | 23.91 | 25.84 |
| OQU85816 | Sorghum | nucleus | 24.22 | 25.66 |
| CDY06393 | Canola | nucleus | 23.6 | 25.5 |
| CDY14662 | Canola | nucleus | 22.05 | 25.27 |
| CDX74133 | Canola | nucleus | 22.05 | 25.27 |
| CDY18809 | Canola | nucleus | 21.43 | 25.18 |
| CDX98930 | Canola | nucleus | 20.5 | 24.72 |
| CDX70098 | Canola | nucleus | 20.19 | 24.34 |
| CDY19591 | Canola | nucleus | 21.43 | 23.47 |
| Zm00001d026305_P002 | Maize | nucleus | 23.29 | 16.59 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078E3C3 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:CDX96435 | ProteinID:CDX96435 | ProteinID:CDX96435.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | EnsemblPlantsGene:GSBRNA2T00102603001 | InterPro:IPR001289 |
| InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF8 | SMART:SM00521 | UniParc:UPI0004EDB0F6 | : | : | : |
Description
BnaA07g30460D
Coordinates
chrLK031894:-:830148..832251
Molecular Weight (calculated)
35646.0 Da
IEP (calculated)
9.815
GRAVY (calculated)
-0.707
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKGSTLPY LNTSISWGGM IPNDPLSLKV VDARTEHLHT TKQISFQDQD SPSTQSTCQS YTEVASSGDD HPSRQISFST KSGPEETQRK VSATHTKSGA
101: MTGFPNMHFA PTQANFSFHY ADPQYGGLLA TPYLPHAPTC NPQMVGMVPG RVALPVEITE AEPVFVNAKQ YHAIMRRRQQ RAKLEAQNKL IKARKPYLHE
201: SRHVHALKRP RGSGGRFLNT KKLLQESEQV AAKEQERDKS VQQANMSRFK AHMLQHNKDR GGSTTSGSDV TCVSDGADIF GHTEFQFSGF PIPTQTNRAM
301: LVHGQSNDMH GGGELHHFSV HI
101: MTGFPNMHFA PTQANFSFHY ADPQYGGLLA TPYLPHAPTC NPQMVGMVPG RVALPVEITE AEPVFVNAKQ YHAIMRRRQQ RAKLEAQNKL IKARKPYLHE
201: SRHVHALKRP RGSGGRFLNT KKLLQESEQV AAKEQERDKS VQQANMSRFK AHMLQHNKDR GGSTTSGSDV TCVSDGADIF GHTEFQFSGF PIPTQTNRAM
301: LVHGQSNDMH GGGELHHFSV HI
001: MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
Arabidopsis Description
HAP2CNuclear factor Y, subunit A3 [Source:UniProtKB/TrEMBL;Acc:F4IEZ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.