Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85816 | Sorghum | nucleus | 78.16 | 75.33 |
| Zm00001d029489_P002 | Maize | nucleus | 19.8 | 64.44 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 53.24 | 61.42 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 53.24 | 61.18 |
| Os02t0776400-01 | Rice | nucleus | 55.97 | 60.74 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 52.56 | 60.63 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 51.88 | 54.09 |
| KRH37469 | Soybean | nucleus | 30.03 | 38.6 |
| KRH02649 | Soybean | nucleus | 27.3 | 37.56 |
| KRH19255 | Soybean | nucleus | 29.69 | 37.34 |
| KRH12475 | Soybean | nucleus | 29.01 | 37.28 |
| PGSC0003DMT400055982 | Potato | nucleus | 26.62 | 36.11 |
| Zm00001d022109_P003 | Maize | nucleus | 33.11 | 32.23 |
| Bra014368.1-P | Field mustard | nucleus | 25.26 | 32.03 |
| CDY69800 | Canola | nucleus | 25.26 | 32.03 |
| Bra037968.1-P | Field mustard | nucleus | 27.65 | 31.76 |
| CDY26138 | Canola | nucleus | 24.91 | 31.06 |
| CDY56623 | Canola | nucleus | 24.57 | 30.77 |
| CDY02477 | Canola | nucleus | 23.89 | 30.7 |
| Zm00001d006835_P002 | Maize | nucleus | 31.06 | 30.33 |
| Bra030899.1-P | Field mustard | nucleus | 25.26 | 29.48 |
| CDY51397 | Canola | nucleus | 27.99 | 28.77 |
| Bra030996.1-P | Field mustard | mitochondrion | 20.48 | 28.44 |
| CDY33084 | Canola | nucleus | 28.33 | 27.76 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 22.53 | 27.5 |
| CDY48025 | Canola | nucleus | 26.96 | 27.15 |
| Bra008052.1-P | Field mustard | nucleus | 26.96 | 27.15 |
| Zm00001d033602_P002 | Maize | nucleus | 24.23 | 26.89 |
| Solyc08g062210.2.1 | Tomato | nucleus | 29.69 | 26.77 |
| CDY39091 | Canola | nucleus | 27.99 | 26.62 |
| Bra021527.1-P | Field mustard | nucleus | 27.99 | 26.62 |
| Zm00001d027874_P004 | Maize | nucleus | 23.89 | 26.62 |
| KRH47551 | Soybean | nucleus | 31.4 | 26.44 |
| AT1G54160.1 | Thale cress | nucleus | 27.65 | 26.3 |
| CDY33253 | Canola | nucleus | 27.65 | 26.3 |
| AT3G14020.1 | Thale cress | nucleus | 26.28 | 25.0 |
| KRH10071 | Soybean | nucleus | 24.91 | 24.58 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 27.99 | 24.4 |
| CDX82133 | Canola | nucleus | 26.28 | 24.14 |
| AT1G17590.3 | Thale cress | nucleus | 26.96 | 24.09 |
| KRH06120 | Soybean | nucleus | 25.94 | 23.82 |
| CDX96435 | Canola | nucleus | 25.94 | 23.6 |
| Bra016031.1-P | Field mustard | nucleus | 25.94 | 23.6 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 31.74 | 23.08 |
| CDY21741 | Canola | nucleus | 25.26 | 22.98 |
| Zm00001d033215_P001 | Maize | nucleus | 24.23 | 22.05 |
| AT1G72830.2 | Thale cress | nucleus | 25.6 | 21.99 |
| CDX72950 | Canola | nucleus | 25.6 | 21.87 |
| Zm00001d041491_P001 | Maize | nucleus | 21.5 | 21.8 |
| CDY30854 | Canola | nucleus | 10.58 | 21.23 |
| Zm00001d013676_P002 | Maize | nucleus | 23.89 | 20.53 |
| Zm00001d031092_P001 | Maize | nucleus | 22.53 | 20.0 |
| CDY70458 | Canola | nucleus | 26.62 | 19.26 |
| Zm00001d007882_P001 | Maize | nucleus | 18.43 | 18.37 |
| CDX81837 | Canola | nucleus | 16.72 | 16.44 |
| Zm00001d026305_P002 | Maize | nucleus | 22.87 | 14.82 |
Protein Annotations
| MapMan:15.5.51.1 | UniProt:A0A1D6HLV3 | ProteinID:AQK75361.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 |
| InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF10 |
| SMART:SM00521 | SignalP:SignalP-noTM | UniParc:UPI000843423C | EnsemblPlantsGene:Zm00001d018255 | EnsemblPlants:Zm00001d018255_P001 | EnsemblPlants:Zm00001d018255_T001 |
| SEG:seg | : | : | : | : | : |
Description
CCAAT-HAP2-transcription factor 213Nuclear transcription factor Y subunit A-3
Coordinates
chr5:-:217462041..217466991
Molecular Weight (calculated)
31908.9 Da
IEP (calculated)
10.851
GRAVY (calculated)
-0.456
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MYASLDCSVK HLLLMSGCVC YLGLGCMSLG NTGNSFGKTV NDHLRSTLSF DNKQPPFASQ NFDYGQTIAC ISYPYNRSRS GDVWAAYESR TSTATVLHLK
101: QFRSQIAGGG SSTRIPLPLE LAENEPIYVN PKQYHGILRR RQLRAKLEAQ NKLVRARKPY LHESRHLHAM KRARGSGGRF LNTKQLQQSH TALTRSTTTS
201: GTSSSGSTHL RLGGGAAAAG DRSVLAPKTM ASQDSSKKAV SSALAFTATP MLRRDDGFLQ HPSHLFSFSG HFGQASAQAG VHNGSQHRVP VMR
101: QFRSQIAGGG SSTRIPLPLE LAENEPIYVN PKQYHGILRR RQLRAKLEAQ NKLVRARKPY LHESRHLHAM KRARGSGGRF LNTKQLQQSH TALTRSTTTS
201: GTSSSGSTHL RLGGGAAAAG DRSVLAPKTM ASQDSSKKAV SSALAFTATP MLRRDDGFLQ HPSHLFSFSG HFGQASAQAG VHNGSQHRVP VMR
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.