Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21741 | Canola | nucleus | 69.51 | 70.81 |
| CDX81837 | Canola | nucleus | 59.76 | 65.77 |
| AT1G72830.2 | Thale cress | nucleus | 65.55 | 63.05 |
| Zm00001d029489_P002 | Maize | nucleus | 16.16 | 58.89 |
| Bra030996.1-P | Field mustard | mitochondrion | 36.28 | 56.4 |
| KRH06120 | Soybean | nucleus | 37.5 | 38.56 |
| KRH47551 | Soybean | nucleus | 40.55 | 38.22 |
| Os03t0174900-01 | Rice | vacuole | 23.17 | 36.36 |
| AT3G14020.1 | Thale cress | nucleus | 33.54 | 35.71 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 31.1 | 35.05 |
| Os07t0608200-01 | Rice | nucleus | 32.32 | 34.87 |
| KRH10071 | Soybean | nucleus | 31.4 | 34.68 |
| EER92762 | Sorghum | nucleus | 26.22 | 34.68 |
| AT1G30500.2 | Thale cress | nucleus | 19.82 | 34.21 |
| AT1G54160.1 | Thale cress | nucleus | 31.71 | 33.77 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 29.57 | 33.68 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 25.0 | 33.61 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 24.7 | 33.47 |
| EER94699 | Sorghum | nucleus | 30.79 | 32.69 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 29.57 | 32.33 |
| AT2G34720.1 | Thale cress | nucleus | 19.51 | 32.32 |
| Solyc03g121940.2.1 | Tomato | nucleus | 23.48 | 31.95 |
| PGSC0003DMT400006358 | Potato | nucleus | 27.13 | 31.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.88 | 31.41 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 30.18 | 31.23 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 28.05 | 30.67 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 31.4 | 30.65 |
| EER99688 | Sorghum | nucleus | 28.05 | 30.56 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 28.05 | 30.36 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 25.91 | 29.31 |
| Os03t0411100-01 | Rice | nucleus | 28.05 | 29.02 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 22.56 | 29.02 |
| Zm00001d022109_P003 | Maize | nucleus | 26.52 | 28.9 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 22.26 | 28.74 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 22.26 | 28.74 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 29.27 | 28.66 |
| Zm00001d006835_P002 | Maize | nucleus | 25.61 | 28.0 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 23.17 | 27.05 |
| Os02t0776400-01 | Rice | nucleus | 22.26 | 27.04 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 24.09 | 26.96 |
| Zm00001d027874_P004 | Maize | nucleus | 21.04 | 26.24 |
| AT5G12840.3 | Thale cress | nucleus | 21.65 | 26.1 |
| OQU85816 | Sorghum | nucleus | 23.78 | 25.66 |
| AT3G20910.1 | Thale cress | nucleus | 23.48 | 25.41 |
| AT5G06510.2 | Thale cress | nucleus | 19.51 | 23.79 |
| AT3G05690.2 | Thale cress | mitochondrion | 20.73 | 20.48 |
| Zm00001d026305_P002 | Maize | nucleus | 20.43 | 14.82 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:838335 | ProteinID:AAF79478.1 | EMBL:AB493463 | EMBL:AC034257 | ProteinID:AEE29608.1 |
| ProteinID:AEE29609.1 | ProteinID:AEE29610.1 | ProteinID:AEE29611.1 | ArrayExpress:AT1G17590 | EnsemblPlantsGene:AT1G17590 | RefSeq:AT1G17590 |
| TAIR:AT1G17590 | RefSeq:AT1G17590-TAIR-G | EnsemblPlants:AT1G17590.3 | TAIR:AT1G17590.3 | Unigene:At.15174 | EMBL:BT033080 |
| UniProt:C0SUW0 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | Symbol:NF-YA8 | InterPro:NFYA | RefSeq:NP_001185024.1 |
| RefSeq:NP_173202.1 | RefSeq:NP_973850.1 | RefSeq:NP_973851.1 | PFAM:PF02045 | PO:PO:0000191 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PRINTS:PR00616 | ScanProsite:PS00686 |
| PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 | UniProt:Q9LNP6 | SMART:SM00521 | UniParc:UPI0000162DD1 |
| SEG:seg | : | : | : | : | : |
Description
NFYA8Uncharacterized protein At1g17590 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW0]
Coordinates
chr1:-:6050177..6052619
Molecular Weight (calculated)
36464.6 Da
IEP (calculated)
9.576
GRAVY (calculated)
-0.666
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKVSFTSS VAHSTPPYLS TSISWGLPTK SNGVTESLSL KVVDARPERL INTKNISFQD QDSSSTLSSA QSSNDVTSSG DDNPSRQISF LAHSDVCKGF
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.