Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G172500.1 | Wheat | nucleus | 95.33 | 94.39 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 91.33 | 91.33 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 94.33 | 84.48 |
| Os07t0608200-01 | Rice | nucleus | 65.67 | 64.8 |
| Zm00001d006835_P002 | Maize | nucleus | 58.33 | 58.33 |
| Zm00001d022109_P003 | Maize | nucleus | 58.33 | 58.14 |
| EER99688 | Sorghum | nucleus | 57.33 | 57.14 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 39.33 | 48.36 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 45.0 | 46.88 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 45.0 | 46.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.0 | 43.27 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 43.33 | 41.01 |
| CDY69800 | Canola | nucleus | 29.67 | 38.53 |
| Bra014368.1-P | Field mustard | nucleus | 29.67 | 38.53 |
| CDY26138 | Canola | nucleus | 30.0 | 38.3 |
| KRH19255 | Soybean | nucleus | 29.0 | 37.34 |
| KRH37469 | Soybean | nucleus | 28.33 | 37.28 |
| KRH12475 | Soybean | nucleus | 28.0 | 36.84 |
| KRH02649 | Soybean | nucleus | 25.67 | 36.15 |
| CDY02477 | Canola | nucleus | 27.33 | 35.96 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 30.33 | 35.69 |
| CDY56623 | Canola | nucleus | 27.67 | 35.47 |
| Bra037968.1-P | Field mustard | nucleus | 30.0 | 35.29 |
| PGSC0003DMT400055982 | Potato | nucleus | 25.33 | 35.19 |
| Bra030899.1-P | Field mustard | nucleus | 29.33 | 35.06 |
| CDY48025 | Canola | nucleus | 32.33 | 33.33 |
| Bra008052.1-P | Field mustard | nucleus | 32.0 | 32.99 |
| CDY51397 | Canola | nucleus | 30.67 | 32.28 |
| CDY33084 | Canola | nucleus | 31.0 | 31.1 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 21.33 | 30.92 |
| AT1G54160.1 | Thale cress | nucleus | 31.67 | 30.84 |
| Bra030996.1-P | Field mustard | mitochondrion | 21.67 | 30.81 |
| KRH47551 | Soybean | nucleus | 35.67 | 30.75 |
| CDX82133 | Canola | nucleus | 32.67 | 30.72 |
| KRH06120 | Soybean | nucleus | 32.0 | 30.09 |
| Zm00001d026305_P002 | Maize | nucleus | 45.0 | 29.87 |
| Solyc08g062210.2.1 | Tomato | nucleus | 32.33 | 29.85 |
| CDX96435 | Canola | nucleus | 32.0 | 29.81 |
| Bra016031.1-P | Field mustard | nucleus | 32.0 | 29.81 |
| CDY39091 | Canola | nucleus | 30.33 | 29.55 |
| Bra021527.1-P | Field mustard | nucleus | 30.33 | 29.55 |
| CDY33253 | Canola | nucleus | 30.0 | 29.22 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 23.33 | 29.17 |
| AT1G72830.2 | Thale cress | nucleus | 33.0 | 29.03 |
| KRH10071 | Soybean | nucleus | 28.67 | 28.96 |
| AT3G14020.1 | Thale cress | nucleus | 29.33 | 28.57 |
| CDX72950 | Canola | nucleus | 32.33 | 28.28 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 31.67 | 28.27 |
| CDY21741 | Canola | nucleus | 30.33 | 28.26 |
| AT1G17590.3 | Thale cress | nucleus | 30.67 | 28.05 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 34.67 | 25.81 |
| CDY70458 | Canola | nucleus | 32.67 | 24.2 |
| CDX81837 | Canola | nucleus | 22.67 | 22.82 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 24.33 | 22.6 |
| CDY30854 | Canola | nucleus | 10.67 | 21.92 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 24.0 | 21.24 |
Protein Annotations
| MapMan:15.5.51.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 |
| InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF27 | SMART:SM00521 | EnsemblPlantsGene:TraesCS2B01G198700 | EnsemblPlants:TraesCS2B01G198700.1 | SEG:seg |
Description
No Description!
Coordinates
chr2B:+:176406772..176409106
Molecular Weight (calculated)
32800.6 Da
IEP (calculated)
10.197
GRAVY (calculated)
-0.746
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDHPGHPIS NYDFLSGNGC HTKKLVHKNY DRNSSSAKSG RSQQEASATS DCSLNEQHTS RPPSQSDNDN DHGKPDQHMV KPLLSLGNPE TVAPPPMLDC
101: SQSFAYIPYT ADAYAGIFPG YASHAIVHPQ LNAATNSRVP LPVEPAAEEP MFVNAKQYHA ILRRRQIRAK LEAQNKLVKA RKPYLHESRH RHAMKRARGT
201: GGRFLNTKQL EEQKQKQASG GASCTKVLGK NTLLQSSSAF APSASAPSNM SSFSTTGMLA NQERTCFPSV GFRPTFSFSA LNGNGKLAPN GMHQRASMMR
101: SQSFAYIPYT ADAYAGIFPG YASHAIVHPQ LNAATNSRVP LPVEPAAEEP MFVNAKQYHA ILRRRQIRAK LEAQNKLVKA RKPYLHESRH RHAMKRARGT
201: GGRFLNTKQL EEQKQKQASG GASCTKVLGK NTLLQSSSAF APSASAPSNM SSFSTTGMLA NQERTCFPSV GFRPTFSFSA LNGNGKLAPN GMHQRASMMR
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.