Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008052.1-P | Field mustard | nucleus | 99.66 | 99.66 |
| CDX82133 | Canola | nucleus | 92.78 | 84.64 |
| CDX96435 | Canola | nucleus | 82.13 | 74.22 |
| AT1G72830.2 | Thale cress | nucleus | 81.1 | 69.21 |
| CDX72950 | Canola | nucleus | 80.41 | 68.22 |
| Zm00001d029489_P002 | Maize | nucleus | 18.56 | 60.0 |
| CDY70458 | Canola | nucleus | 83.16 | 59.75 |
| CDY21741 | Canola | nucleus | 58.76 | 53.11 |
| CDX81837 | Canola | nucleus | 50.17 | 48.99 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 37.46 | 45.42 |
| CDY69800 | Canola | nucleus | 34.71 | 43.72 |
| CDY26138 | Canola | nucleus | 34.36 | 42.55 |
| CDY56623 | Canola | nucleus | 32.99 | 41.03 |
| CDY02477 | Canola | nucleus | 31.27 | 39.91 |
| Os03t0174900-01 | Rice | vacuole | 27.15 | 37.8 |
| CDY51397 | Canola | nucleus | 36.43 | 37.19 |
| CDY02298 | Canola | nucleus | 23.37 | 37.16 |
| KRH47551 | Soybean | nucleus | 44.33 | 37.07 |
| CDY30854 | Canola | nucleus | 18.56 | 36.99 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 36.77 | 36.77 |
| CDY09571 | Canola | nucleus | 23.02 | 36.61 |
| EER92762 | Sorghum | nucleus | 30.93 | 36.29 |
| Os07t0608200-01 | Rice | nucleus | 37.8 | 36.18 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 35.74 | 36.11 |
| CDY33084 | Canola | nucleus | 36.77 | 35.79 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 29.55 | 35.25 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 29.21 | 35.12 |
| KRH06120 | Soybean | nucleus | 37.8 | 34.48 |
| CDY31636 | Canola | nucleus | 23.02 | 34.01 |
| CDY39091 | Canola | nucleus | 35.74 | 33.77 |
| CDX84285 | Canola | nucleus | 22.68 | 33.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.08 | 33.65 |
| CDY33253 | Canola | nucleus | 35.4 | 33.44 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 36.08 | 33.12 |
| EER94699 | Sorghum | nucleus | 35.05 | 33.01 |
| CDY05192 | Canola | nucleus | 20.27 | 32.96 |
| PGSC0003DMT400006358 | Potato | nucleus | 31.96 | 32.86 |
| CDX78492 | Canola | nucleus | 23.02 | 32.68 |
| Solyc03g121940.2.1 | Tomato | nucleus | 26.8 | 32.37 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 33.33 | 32.33 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 33.33 | 32.33 |
| KRH10071 | Soybean | nucleus | 32.99 | 32.32 |
| EER99688 | Sorghum | nucleus | 33.33 | 32.23 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 33.33 | 32.01 |
| CDY37330 | Canola | nucleus | 19.59 | 31.67 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 35.05 | 30.36 |
| Zm00001d006835_P002 | Maize | nucleus | 31.27 | 30.33 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 29.9 | 30.0 |
| Os03t0411100-01 | Rice | nucleus | 32.65 | 29.97 |
| Zm00001d022109_P003 | Maize | nucleus | 30.93 | 29.9 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 26.12 | 29.8 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 25.77 | 29.53 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 33.68 | 29.25 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 25.43 | 29.13 |
| Zm00001d027874_P004 | Maize | nucleus | 26.12 | 28.9 |
| CDX91161 | Canola | nucleus | 20.96 | 27.85 |
| Os02t0776400-01 | Rice | nucleus | 25.43 | 27.41 |
| CDX85686 | Canola | nucleus | 21.99 | 27.12 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 27.15 | 26.96 |
| CDX70480 | Canola | nucleus | 23.37 | 26.25 |
| CDX82223 | Canola | nucleus | 24.74 | 25.71 |
| CDY53967 | Canola | nucleus | 25.09 | 25.7 |
| OQU85816 | Sorghum | nucleus | 26.8 | 25.66 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 24.4 | 25.27 |
| CDX97206 | Canola | nucleus | 24.74 | 25.26 |
| CDY32398 | Canola | nucleus | 25.43 | 24.83 |
| CDY06393 | Canola | nucleus | 25.09 | 24.5 |
| CDY18809 | Canola | nucleus | 21.99 | 23.36 |
| CDY19591 | Canola | nucleus | 23.37 | 23.13 |
| CDX74133 | Canola | nucleus | 21.31 | 22.06 |
| CDY14662 | Canola | nucleus | 21.31 | 22.06 |
| CDX98930 | Canola | nucleus | 19.93 | 21.72 |
| CDX70098 | Canola | nucleus | 19.93 | 21.72 |
| Zm00001d026305_P002 | Maize | nucleus | 25.43 | 16.37 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078IB02 | UniProt:A0A078IB02 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:CDY48025 | ProteinID:CDY48025 |
| ProteinID:CDY48025.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | EnsemblPlantsGene:GSBRNA2T00088675001 |
| InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 | SMART:SM00521 | UniParc:UPI0004EF3044 | SEG:seg | : |
Description
BnaA02g16180DBnaA02g16180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB02]
Coordinates
chrLK032750:-:30388..32464
Molecular Weight (calculated)
32283.7 Da
IEP (calculated)
9.336
GRAVY (calculated)
-0.842
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVVDARPEH TTKQISFQDQ DSSSTQSTGQ SYTDIASSGD DDNPSRQIPF STKSGSEETQ HKGFTTHPKP GSMTGLPSIH FAPPQANFSF HYADPQFGSM
101: LAATYLPQAP ACNHQMVGMV PGRVPLPVEI TETEPVFVNA KQYHAIMRRR QQRAKLEAQN KLIKARKPYL HESRHVHALK RPRGSGGRFL NTKKLLQESE
201: QEHGKSVQQE SEKANMSRFE AHMLKHSKDR GSTNSGSDIT SLSDGADVFG HSEFQFSGFP IPTQTNQAMR VHGQSNDMHG GGDLHHFSVH I
101: LAATYLPQAP ACNHQMVGMV PGRVPLPVEI TETEPVFVNA KQYHAIMRRR QQRAKLEAQN KLIKARKPYL HESRHVHALK RPRGSGGRFL NTKKLLQESE
201: QEHGKSVQQE SEKANMSRFE AHMLKHSKDR GSTNSGSDIT SLSDGADVFG HSEFQFSGFP IPTQTNQAMR VHGQSNDMHG GGDLHHFSVH I
001: MDKKVSFTSS VAHSTPPYLS TSISWGLPTK SNGVTESLSL KVVDARPERL INTKNISFQD QDSSSTLSSA QSSNDVTSSG DDNPSRQISF LAHSDVCKGF
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
Arabidopsis Description
NFYA8Uncharacterized protein At1g17590 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.