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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014368.1-P Field mustard nucleus 98.27 98.27
CDY26138 Canola nucleus 94.81 93.19
CDY56623 Canola nucleus 73.59 72.65
CDY02477 Canola nucleus 69.7 70.61
CDY51397 Canola nucleus 82.25 66.67
CDY33084 Canola nucleus 81.82 63.21
AT1G54160.1 Thale cress nucleus 81.39 61.04
Zm00001d029489_P002 Maize nucleus 22.94 58.89
CDY39091 Canola nucleus 53.25 39.94
CDY33253 Canola nucleus 52.38 39.29
CDY48025 Canola nucleus 43.72 34.71
EER92762 Sorghum nucleus 35.5 33.06
CDX82133 Canola nucleus 45.45 32.92
TraesCS4B01G290400.1 Wheat nucleus 34.63 32.79
CDY02298 Canola nucleus 25.97 32.79
TraesCS4D01G289600.1 Wheat nucleus 34.2 32.64
Os03t0174900-01 Rice vacuole 29.44 32.54
KRH47551 Soybean nucleus 48.92 32.47
KRH06120 Soybean nucleus 44.16 31.97
CDY09571 Canola nucleus 25.11 31.69
HORVU2Hr1G032130.4 Barley nucleus 40.69 31.33
CDY05192 Canola nucleus 24.24 31.28
CDY37330 Canola nucleus 24.24 31.11
Os07t0608200-01 Rice nucleus 40.69 30.92
CDX96435 Canola nucleus 42.86 30.75
EER99688 Sorghum nucleus 39.39 30.23
GSMUA_Achr8P16700_001 Banana nucleus 37.66 30.21
CDX84285 Canola nucleus 25.54 30.1
PGSC0003DMT400006358 Potato nucleus 36.8 30.04
CDY31636 Canola nucleus 25.54 29.95
GSMUA_Achr2P21730_001 Banana nucleus 37.66 29.9
TraesCS2B01G198700.1 Wheat nucleus 38.53 29.67
Zm00001d022109_P003 Maize nucleus 38.53 29.57
CDY21741 Canola nucleus 41.13 29.5
Zm00001d006835_P002 Maize nucleus 38.1 29.33
CDX78492 Canola nucleus 25.97 29.27
CDX72947 Canola nucleus, plasma membrane, plastid 30.3 29.17
CDX72950 Canola nucleus 43.29 29.15
Solyc03g121940.2.1 Tomato nucleus 30.3 29.05
TraesCS2A01G172500.1 Wheat nucleus 38.1 29.04
KRH10071 Soybean nucleus 37.23 28.96
HORVU4Hr1G075830.4 Barley nucleus 34.63 27.59
TraesCS6D01G315300.1 Wheat nucleus 30.3 27.56
EER94699 Sorghum nucleus 36.8 27.51
TraesCS6B01G366100.2 Wheat nucleus 30.3 27.45
TraesCS6A01G335400.1 Wheat nucleus 29.87 27.17
Os02t0776400-01 Rice nucleus 31.6 27.04
Os03t0411100-01 Rice nucleus 36.8 26.81
CDX85686 Canola nucleus 27.27 26.69
TraesCS2D01G179600.2 Wheat nucleus 38.53 26.57
CDX91161 Canola nucleus 25.11 26.48
GSMUA_AchrUn_... Banana nucleus 35.06 25.96
HORVU6Hr1G081080.12 Barley nucleus 31.17 25.62
GSMUA_Achr8P30700_001 Banana nucleus 35.06 25.55
OQU85816 Sorghum nucleus 33.33 25.33
Zm00001d018255_P001 Maize endoplasmic reticulum, extracellular, golgi 32.03 25.26
CDX70480 Canola nucleus 28.14 25.1
Zm00001d027874_P004 Maize nucleus 28.14 24.71
CDX82223 Canola nucleus 29.0 23.93
CDX81837 Canola nucleus 30.74 23.83
CDY70458 Canola nucleus 41.56 23.7
CDX74133 Canola nucleus 28.57 23.49
CDY14662 Canola nucleus 28.57 23.49
CDY18809 Canola nucleus 27.71 23.36
CDY53967 Canola nucleus 28.57 23.24
CDY06393 Canola nucleus 29.44 22.82
CDX97206 Canola nucleus 28.14 22.81
CDY30854 Canola nucleus 14.29 22.6
CDY32398 Canola nucleus 28.57 22.15
CDX98930 Canola nucleus 25.54 22.1
CDX70098 Canola nucleus 25.54 22.1
CDY19591 Canola nucleus 27.27 21.43
Zm00001d026305_P002 Maize nucleus 28.57 14.6
Protein Annotations
MapMan:15.5.51.1GO:A0A078JTP5UniProt:A0A078JTP5InterPro:CCAAT-binding_factor_CSEnsemblPlants:CDY69800ProteinID:CDY69800
ProteinID:CDY69800.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016602EnsemblPlantsGene:GSBRNA2T00092506001
InterPro:IPR001289InterPro:NFYAPFAM:PF02045PRINTS:PR00616ScanProsite:PS00686PFscan:PS51152
PANTHER:PTHR12632PANTHER:PTHR12632:SF8SMART:SM00521UniParc:UPI0004EF0DC4SEG:seg:
Description
BnaAnng31560DBnaAnng31560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTP5]
Coordinates
chrLK040374:-:661..2403
Molecular Weight (calculated)
25673.4 Da
IEP (calculated)
10.430
GRAVY (calculated)
-0.670
Length
231 amino acids
Sequence
(BLAST)
001: MQVPTNSNIQ GSQSFSLTKN LMMPCKMKHS GLQLQDQDSS STQSTEESGG GYIVSPQGKA IASYTKSTTT SSMVSHDSVF PPTYFNGFLA PEYASQSTVL
101: PHVEMMGLVT SRVPLPHNYQ ENEPMFVNAK QYHAILRRRK HRAKLEAQNK LIKSRKPYLH ESRHLHALKR ARGSGGRFLN TKKLQESSKS LCSSLTTPSS
201: SSDRDNMFQN APFRFSGYPS THHVSALMSG T
Best Arabidopsis Sequence Match ( AT1G54160.1 )
(BLAST)
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.