Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009200.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX98930 | Canola | nucleus | 90.64 | 90.64 |
| AT5G06510.2 | Thale cress | nucleus | 70.79 | 70.26 |
| CDY05192 | Canola | nucleus | 43.07 | 64.25 |
| CDX74133 | Canola | nucleus | 60.3 | 57.3 |
| CDY14662 | Canola | nucleus | 60.3 | 57.3 |
| CDY18809 | Canola | nucleus | 57.3 | 55.84 |
| KRH68018 | Soybean | nucleus | 48.69 | 39.63 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 47.94 | 36.99 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 45.32 | 36.89 |
| KRH72156 | Soybean | nucleus | 45.69 | 36.42 |
| KRH32866 | Soybean | nucleus | 44.19 | 36.09 |
| Solyc10g081840.1.1 | Tomato | nucleus | 20.6 | 35.71 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 26.59 | 35.32 |
| PGSC0003DMT400072322 | Potato | nucleus | 24.34 | 33.16 |
| Solyc01g006930.2.1 | Tomato | nucleus | 37.83 | 32.48 |
| PGSC0003DMT400055061 | Potato | nucleus | 36.33 | 31.19 |
| CDY37330 | Canola | nucleus | 19.85 | 29.44 |
| CDY02298 | Canola | nucleus | 19.1 | 27.87 |
| CDY09571 | Canola | nucleus | 18.73 | 27.32 |
| CDX78492 | Canola | nucleus | 20.97 | 27.32 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 34.46 | 27.14 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 32.96 | 27.08 |
| Os12t0618600-01 | Rice | nucleus | 31.46 | 27.01 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 32.96 | 26.99 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 32.58 | 26.93 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 32.58 | 26.85 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 34.08 | 26.69 |
| Zm00001d031092_P001 | Maize | nucleus | 32.96 | 26.67 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 34.08 | 26.61 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 31.84 | 26.4 |
| Zm00001d033215_P001 | Maize | nucleus | 31.84 | 26.4 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 33.71 | 26.39 |
| KXG37939 | Sorghum | nucleus | 33.71 | 26.09 |
| CDX91161 | Canola | nucleus | 21.35 | 26.03 |
| CDX84285 | Canola | nucleus | 19.1 | 26.02 |
| CDY31636 | Canola | nucleus | 19.1 | 25.89 |
| CDY69800 | Canola | nucleus | 22.1 | 25.54 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 32.21 | 25.52 |
| CDX85686 | Canola | nucleus | 22.47 | 25.42 |
| Zm00001d013676_P002 | Maize | nucleus | 32.21 | 25.22 |
| CDY26138 | Canola | nucleus | 22.1 | 25.11 |
| CDY02477 | Canola | nucleus | 20.97 | 24.56 |
| CDY56623 | Canola | nucleus | 21.35 | 24.36 |
| Os03t0647600-01 | Rice | nucleus | 31.84 | 24.01 |
| CDX70480 | Canola | nucleus | 22.85 | 23.55 |
| CDY53967 | Canola | nucleus | 24.34 | 22.89 |
| CDX97206 | Canola | nucleus | 24.34 | 22.81 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 20.22 | 22.5 |
| CDY51397 | Canola | nucleus | 23.97 | 22.46 |
| CDX82223 | Canola | nucleus | 23.22 | 22.14 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 32.21 | 22.05 |
| Os07t0158500-00 | Rice | nucleus | 31.09 | 21.9 |
| Zm00001d007882_P001 | Maize | nucleus | 23.97 | 21.77 |
| OQU79642 | Sorghum | plastid | 34.08 | 21.72 |
| CDY33084 | Canola | nucleus | 23.22 | 20.74 |
| CDY06393 | Canola | nucleus | 22.85 | 20.47 |
| CDX96435 | Canola | nucleus | 24.34 | 20.19 |
| CDY48025 | Canola | nucleus | 21.72 | 19.93 |
| OQU88458 | Sorghum | nucleus | 23.97 | 19.81 |
| CDY39091 | Canola | nucleus | 22.85 | 19.81 |
| CDY33253 | Canola | nucleus | 22.47 | 19.48 |
| CDY32398 | Canola | nucleus | 21.72 | 19.46 |
| CDX82133 | Canola | nucleus | 23.22 | 19.44 |
| CDY19591 | Canola | nucleus | 21.35 | 19.39 |
| CDX72950 | Canola | nucleus | 24.72 | 19.24 |
| CDY21741 | Canola | nucleus | 22.1 | 18.32 |
| CDY30854 | Canola | nucleus | 9.74 | 17.81 |
| CDY70458 | Canola | nucleus | 22.85 | 15.06 |
| CDX81837 | Canola | nucleus | 14.98 | 13.42 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078C558 | EnsemblPlants:CDX70098 | ProteinID:CDX70098 | ProteinID:CDX70098.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00136206001 | InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 |
| PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | SMART:SM00521 | UniParc:UPI0002544FFB |
Description
BnaA10g24470D
Coordinates
chrLK031790:-:3080584..3081701
Molecular Weight (calculated)
29847.4 Da
IEP (calculated)
9.806
GRAVY (calculated)
-0.675
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTEYCKERE ELFSPPQASC LWNIAFGPPA LTQESLSSDS FAGVKVVTPE TESEQGGGKS SRDHVSKPHV AFAMQSSCFE FGFAQPTIYK KHPDHVGQYY
101: GVISGYGSQI SPNRVMLPLK METEEDGTIY VNSKQYHGII RRRQSRAKAL LKNKINNFRK QPYMHHSRHL HAMRRPRGSG GRFLNTKKAD AALQSRPSNP
201: QSSEVFHPKN RTMTSSMETY GPNVSSSDVT SMNHFLSPSI YYNGGNMGIP SKWIATAMDI GCCNLKT
101: GVISGYGSQI SPNRVMLPLK METEEDGTIY VNSKQYHGII RRRQSRAKAL LKNKINNFRK QPYMHHSRHL HAMRRPRGSG GRFLNTKKAD AALQSRPSNP
201: QSSEVFHPKN RTMTSSMETY GPNVSSSDVT SMNHFLSPSI YYNGGNMGIP SKWIATAMDI GCCNLKT
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.