Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P28390_001 | Banana | nucleus | 64.69 | 67.7 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 64.99 | 67.59 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 37.98 | 63.68 |
| CDY05192 | Canola | nucleus | 21.66 | 40.78 |
| PGSC0003DMT400072322 | Potato | nucleus | 23.15 | 39.8 |
| Solyc10g081840.1.1 | Tomato | nucleus | 18.1 | 39.61 |
| KRH72156 | Soybean | nucleus | 39.17 | 39.4 |
| KRH68018 | Soybean | nucleus | 38.28 | 39.33 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 38.28 | 39.33 |
| KRH32866 | Soybean | nucleus | 37.09 | 38.23 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 37.98 | 36.99 |
| Solyc01g006930.2.1 | Tomato | nucleus | 33.83 | 36.66 |
| AT5G06510.2 | Thale cress | nucleus | 29.08 | 36.43 |
| PGSC0003DMT400055061 | Potato | nucleus | 33.53 | 36.33 |
| CDX98930 | Canola | nucleus | 26.71 | 33.71 |
| CDY18809 | Canola | nucleus | 26.71 | 32.85 |
| Os07t0158500-00 | Rice | nucleus | 36.8 | 32.72 |
| CDY14662 | Canola | nucleus | 27.0 | 32.38 |
| CDX74133 | Canola | nucleus | 27.0 | 32.38 |
| Bra001164.1-P | Field mustard | nucleus | 27.0 | 32.38 |
| CDX70098 | Canola | nucleus | 25.52 | 32.21 |
| Bra009200.1-P | Field mustard | nucleus | 25.52 | 32.21 |
| Bra040529.1-P | Field mustard | nucleus | 26.71 | 32.03 |
| Zm00001d007882_P001 | Maize | nucleus | 26.71 | 30.61 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 21.07 | 30.34 |
| AT3G05690.2 | Thale cress | mitochondrion | 28.19 | 28.61 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 19.58 | 28.21 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 18.99 | 28.07 |
| OQU88458 | Sorghum | nucleus | 25.82 | 26.93 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 22.55 | 25.5 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 21.66 | 25.09 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 23.15 | 24.61 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 20.77 | 24.31 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 22.55 | 23.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.66 | 23.4 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 23.74 | 21.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P31420_001 | EnsemblPlants:GSMUA_Achr4T31420_001 | EnsemblPlantsGene:GSMUA_Achr4G31420_001 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 |
| InterPro:NFYA | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | PFAM:PF02045 | PFscan:PS51152 | PRINTS:PR00616 |
| SEG:seg | SMART:SM00521 | UniParc:UPI000294A0B5 | UniProt:M0STQ4 | MapMan:15.5.51.1 | : |
Description
nuclear transcription factor Y subunit, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G31420_001]
Coordinates
chr4:+:28621134..28625067
Molecular Weight (calculated)
37074.3 Da
IEP (calculated)
8.889
GRAVY (calculated)
-0.445
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTSMFFENH GVGRLLVSQT PQTTQFPWLV GSQPIYGEPL SQMKPITGDH ISVEEQLPAV SRQVNHVIDL SKVRGSAFKI PEKGGNGTVS FSIFLDSKDL
101: IKEQKIQQHL MPFSLQPSLP ENPNCFEQGF GQSMVCPSSS YVDQFYGLYA TYGTQAMNGR MLLPMDMTTE GPIYVNAKQF HAILRRRKAR AKAQKENKSI
201: KVRKPYLHES RHLHAMRRMR GCGGRFLNSK KECSGQGGNG GCKVKDGLPP RPATFARSEI LQSDSLNLNS ASGGSSASGS EVTSVYAQED VDDFHIAEHL
301: CPSVFQSHLI MMNGGQGTSN HSKWGAAADS CCDLLKV
101: IKEQKIQQHL MPFSLQPSLP ENPNCFEQGF GQSMVCPSSS YVDQFYGLYA TYGTQAMNGR MLLPMDMTTE GPIYVNAKQF HAILRRRKAR AKAQKENKSI
201: KVRKPYLHES RHLHAMRRMR GCGGRFLNSK KECSGQGGNG GCKVKDGLPP RPATFARSEI LQSDSLNLNS ASGGSSASGS EVTSVYAQED VDDFHIAEHL
301: CPSVFQSHLI MMNGGQGTSN HSKWGAAADS CCDLLKV
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.