Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74133 | Canola | nucleus | 100.0 | 100.0 |
| Bra001164.1-P | Field mustard | nucleus | 96.8 | 96.8 |
| CDY18809 | Canola | nucleus | 78.29 | 80.29 |
| CDY05192 | Canola | nucleus | 49.11 | 77.09 |
| AT3G05690.2 | Thale cress | mitochondrion | 80.78 | 68.37 |
| CDX98930 | Canola | nucleus | 58.36 | 61.42 |
| CDX70098 | Canola | nucleus | 57.3 | 60.3 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 46.62 | 39.94 |
| KRH68018 | Soybean | nucleus | 46.62 | 39.94 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 47.33 | 38.44 |
| Solyc10g081840.1.1 | Tomato | nucleus | 21.0 | 38.31 |
| KRH72156 | Soybean | nucleus | 44.84 | 37.61 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 26.33 | 36.82 |
| KRH32866 | Soybean | nucleus | 42.7 | 36.7 |
| PGSC0003DMT400072322 | Potato | nucleus | 25.27 | 36.22 |
| Solyc01g006930.2.1 | Tomato | nucleus | 36.65 | 33.12 |
| PGSC0003DMT400055061 | Potato | nucleus | 35.94 | 32.48 |
| CDY02298 | Canola | nucleus | 20.28 | 31.15 |
| CDY09571 | Canola | nucleus | 19.93 | 30.6 |
| CDY02477 | Canola | nucleus | 23.49 | 28.95 |
| Os12t0618600-01 | Rice | nucleus | 32.03 | 28.94 |
| CDY37330 | Canola | nucleus | 18.51 | 28.89 |
| CDX78492 | Canola | nucleus | 21.0 | 28.78 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 33.1 | 28.62 |
| CDY69800 | Canola | nucleus | 23.49 | 28.57 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 33.1 | 28.53 |
| CDY26138 | Canola | nucleus | 23.84 | 28.51 |
| CDY56623 | Canola | nucleus | 23.49 | 28.21 |
| CDX84285 | Canola | nucleus | 19.57 | 28.06 |
| CDY31636 | Canola | nucleus | 19.57 | 27.92 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 32.03 | 27.86 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 33.45 | 27.73 |
| Zm00001d031092_P001 | Maize | nucleus | 32.38 | 27.58 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 33.45 | 27.57 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 33.45 | 27.49 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 31.67 | 27.47 |
| Zm00001d033215_P001 | Maize | nucleus | 30.96 | 27.02 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 32.38 | 27.0 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 32.74 | 26.98 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 30.61 | 26.71 |
| Zm00001d013676_P002 | Maize | nucleus | 30.96 | 25.51 |
| KXG37939 | Sorghum | nucleus | 31.32 | 25.51 |
| Os03t0647600-01 | Rice | nucleus | 31.67 | 25.14 |
| CDX91161 | Canola | nucleus | 19.57 | 25.11 |
| CDX70480 | Canola | nucleus | 22.78 | 24.71 |
| CDX85686 | Canola | nucleus | 20.64 | 24.58 |
| CDY51397 | Canola | nucleus | 24.91 | 24.56 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 32.38 | 23.33 |
| CDY33084 | Canola | nucleus | 24.56 | 23.08 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 19.22 | 22.5 |
| CDX82223 | Canola | nucleus | 22.42 | 22.5 |
| CDY53967 | Canola | nucleus | 22.42 | 22.18 |
| CDX97206 | Canola | nucleus | 22.42 | 22.11 |
| CDY39091 | Canola | nucleus | 24.2 | 22.08 |
| CDX96435 | Canola | nucleus | 25.27 | 22.05 |
| OQU79642 | Sorghum | plastid | 32.38 | 21.72 |
| CDY48025 | Canola | nucleus | 22.06 | 21.31 |
| CDY33253 | Canola | nucleus | 23.13 | 21.1 |
| Zm00001d007882_P001 | Maize | nucleus | 22.06 | 21.09 |
| CDX82133 | Canola | nucleus | 23.84 | 21.0 |
| Os07t0158500-00 | Rice | nucleus | 28.11 | 20.84 |
| CDX72950 | Canola | nucleus | 25.27 | 20.7 |
| CDY21741 | Canola | nucleus | 23.49 | 20.5 |
| CDY32398 | Canola | nucleus | 21.71 | 20.47 |
| CDY06393 | Canola | nucleus | 21.35 | 20.13 |
| OQU88458 | Sorghum | nucleus | 23.13 | 20.12 |
| CDY19591 | Canola | nucleus | 20.64 | 19.73 |
| CDY30854 | Canola | nucleus | 9.61 | 18.49 |
| CDY70458 | Canola | nucleus | 24.2 | 16.79 |
| CDX81837 | Canola | nucleus | 16.73 | 15.77 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078FP68 | UniProt:A0A078FP68 | EnsemblPlants:CDY14662 | ProteinID:CDY14662 | ProteinID:CDY14662.1 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00084442001 | InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 |
| PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | SMART:SM00521 | UniParc:UPI0004EE90C9 |
Description
BnaC05g19190DBnaA03g29140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP68]
Coordinates
chrLK032046:-:41853..43655
Molecular Weight (calculated)
30996.8 Da
IEP (calculated)
10.249
GRAVY (calculated)
-0.625
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQTMREGL PSAPQISWWN AFGSQPLTPE SLSGDNDSLA GVKVRSAGGI EQGVNKQSNS VSHFAFSLGD VKSPRVVPKP HGSAFSMQPP YLELGFSQPQ
101: MYKKYPCVEQ QYYGVLSPYG SHSSVMLPLN METEDGTIFV NSKQYHAIIR RRQSRAKAAA VLDQNKPSSK FRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNNAKKADGT KQTQPQQSNS QDSDVLHPEN VTMNLSNRLG SEVTSMNYFL SSSVHPLGGM VMPSKWITAA AMDNGCCSFK T
101: MYKKYPCVEQ QYYGVLSPYG SHSSVMLPLN METEDGTIFV NSKQYHAIIR RRQSRAKAAA VLDQNKPSSK FRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNNAKKADGT KQTQPQQSNS QDSDVLHPEN VTMNLSNRLG SEVTSMNYFL SSSVHPLGGM VMPSKWITAA AMDNGCCSFK T
001: MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
Arabidopsis Description
UNE8Nuclear factor Y, subunit A2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSX7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.