Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021527.1-P | Field mustard | nucleus | 95.45 | 95.45 |
| CDY39091 | Canola | nucleus | 95.45 | 95.45 |
| AT3G14020.1 | Thale cress | nucleus | 68.83 | 68.83 |
| Zm00001d029489_P002 | Maize | nucleus | 17.21 | 58.89 |
| CDY56623 | Canola | nucleus | 41.23 | 54.27 |
| CDY02477 | Canola | nucleus | 38.96 | 52.63 |
| CDY69800 | Canola | nucleus | 39.29 | 52.38 |
| CDY26138 | Canola | nucleus | 38.96 | 51.06 |
| CDY51397 | Canola | nucleus | 44.16 | 47.72 |
| CDY33084 | Canola | nucleus | 43.83 | 45.15 |
| CDY48025 | Canola | nucleus | 33.44 | 35.4 |
| CDX82133 | Canola | nucleus | 36.04 | 34.8 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 27.27 | 34.71 |
| KRH06120 | Soybean | nucleus | 35.71 | 34.48 |
| Os03t0174900-01 | Rice | vacuole | 23.38 | 34.45 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 27.27 | 34.43 |
| EER92762 | Sorghum | nucleus | 27.6 | 34.27 |
| KRH47551 | Soybean | nucleus | 38.64 | 34.2 |
| CDX96435 | Canola | nucleus | 35.71 | 34.16 |
| CDX72950 | Canola | nucleus | 36.04 | 32.36 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 30.52 | 32.3 |
| CDY02298 | Canola | nucleus | 19.16 | 32.24 |
| CDY09571 | Canola | nucleus | 18.83 | 31.69 |
| CDY21741 | Canola | nucleus | 33.12 | 31.68 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 24.68 | 31.67 |
| CDX84285 | Canola | nucleus | 20.13 | 31.63 |
| CDY31636 | Canola | nucleus | 20.13 | 31.47 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 28.9 | 30.9 |
| EER99688 | Sorghum | nucleus | 30.19 | 30.9 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 29.87 | 30.67 |
| Os07t0608200-01 | Rice | nucleus | 30.19 | 30.59 |
| PGSC0003DMT400006358 | Potato | nucleus | 27.92 | 30.39 |
| Os03t0411100-01 | Rice | nucleus | 31.17 | 30.28 |
| CDY05192 | Canola | nucleus | 17.53 | 30.17 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 29.22 | 30.0 |
| KRH10071 | Soybean | nucleus | 28.9 | 29.97 |
| EER94699 | Sorghum | nucleus | 29.87 | 29.77 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 29.22 | 29.7 |
| Zm00001d006835_P002 | Maize | nucleus | 28.9 | 29.67 |
| Zm00001d022109_P003 | Maize | nucleus | 28.9 | 29.57 |
| CDY37330 | Canola | nucleus | 17.21 | 29.44 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 27.6 | 29.31 |
| Solyc03g121940.2.1 | Tomato | nucleus | 22.73 | 29.05 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 23.7 | 28.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.9 | 28.53 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 29.22 | 28.39 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 23.38 | 28.35 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 23.38 | 28.35 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 26.3 | 27.65 |
| CDX78492 | Canola | nucleus | 18.18 | 27.32 |
| OQU85816 | Sorghum | nucleus | 26.95 | 27.3 |
| Os02t0776400-01 | Rice | nucleus | 23.7 | 27.04 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 28.9 | 26.57 |
| CDX81837 | Canola | nucleus | 24.68 | 25.5 |
| CDX82223 | Canola | nucleus | 23.05 | 25.36 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 23.05 | 25.27 |
| CDY70458 | Canola | nucleus | 33.12 | 25.19 |
| Zm00001d027874_P004 | Maize | nucleus | 21.1 | 24.71 |
| CDY30854 | Canola | nucleus | 11.69 | 24.66 |
| CDY06393 | Canola | nucleus | 23.7 | 24.5 |
| CDX85686 | Canola | nucleus | 18.51 | 24.15 |
| CDY32398 | Canola | nucleus | 23.05 | 23.83 |
| CDX91161 | Canola | nucleus | 16.88 | 23.74 |
| CDY18809 | Canola | nucleus | 21.1 | 23.72 |
| CDX70480 | Canola | nucleus | 19.48 | 23.17 |
| CDY14662 | Canola | nucleus | 21.1 | 23.13 |
| CDX74133 | Canola | nucleus | 21.1 | 23.13 |
| CDY19591 | Canola | nucleus | 22.08 | 23.13 |
| CDY53967 | Canola | nucleus | 20.78 | 22.54 |
| CDX98930 | Canola | nucleus | 19.48 | 22.47 |
| CDX70098 | Canola | nucleus | 19.48 | 22.47 |
| CDX97206 | Canola | nucleus | 20.78 | 22.46 |
| Zm00001d026305_P002 | Maize | nucleus | 20.45 | 13.94 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078H8S4 | UniProt:A0A078H8S4 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:CDY33253 | ProteinID:CDY33253 |
| ProteinID:CDY33253.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | EnsemblPlantsGene:GSBRNA2T00054017001 |
| InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 | SMART:SM00521 | UniParc:UPI0004EF11D8 | SEG:seg | : |
Description
BnaC01g37260DBnaC01g37260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8S4]
Coordinates
chrLK032309:-:372088..373491
Molecular Weight (calculated)
33963.1 Da
IEP (calculated)
10.269
GRAVY (calculated)
-0.632
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEFHRKDSL SSPTTSWGNS VFSNSNVQGS SSSAMTDNNN NNNNTLSLTM EMMSAHFPGM KQTGFQLQGH DDSSSTLSTG GGESSGDVAS LGGHNSNNRY
101: GHNFVTHKEL TCVCNVFPSG SHPKSILSKV SQNSAAPTIE ASWPLHGNCF MSFPYASQHM VQQHPQIGGL MIPSRILLPP YIPENEPSFV NAKQYQAILR
201: RRQHRAKLEA QNKLIKARKP YLHESRHLHA LKRARGSGGR FLNTKKLQES KSPPFLATSV KFRQREILGV AVGSSGPELT GNNMDMFQQD PQLRFSGYPS
301: NHHVSVLM
101: GHNFVTHKEL TCVCNVFPSG SHPKSILSKV SQNSAAPTIE ASWPLHGNCF MSFPYASQHM VQQHPQIGGL MIPSRILLPP YIPENEPSFV NAKQYQAILR
201: RRQHRAKLEA QNKLIKARKP YLHESRHLHA LKRARGSGGR FLNTKKLQES KSPPFLATSV KFRQREILGV AVGSSGPELT GNNMDMFQQD PQLRFSGYPS
301: NHHVSVLM
001: MQEFHSSKDS LPCPATSWDN SVFTNSNVQG SSSLTDNNTL SLTMEMKQTG FQMQHYDSSS TQSTGGESYS EVASLSEPTN RYGHNIVVTH LSGYKENPEN
101: PIGSHSISKV SQDSVVLPIE AASWPLHGNV TPHFNGFLSF PYASQHTVQH PQIRGLVPSR MPLPHNIPEN EPIFVNAKQY QAILRRRERR AKLEAQNKLI
201: KVRKPYLHES RHLHALKRVR GSGGRFLNTK KHQESNSSLS PPFLIPPHVF KNSPGKFRQM DISRGGVVSS VSTTSCSDIT GNNNDMFQQN PQFRFSGYPS
301: NHHVSVLM
101: PIGSHSISKV SQDSVVLPIE AASWPLHGNV TPHFNGFLSF PYASQHTVQH PQIRGLVPSR MPLPHNIPEN EPIFVNAKQY QAILRRRERR AKLEAQNKLI
201: KVRKPYLHES RHLHALKRVR GSGGRFLNTK KHQESNSSLS PPFLIPPHVF KNSPGKFRQM DISRGGVVSS VSTTSCSDIT GNNNDMFQQN PQFRFSGYPS
301: NHHVSVLM
Arabidopsis Description
NFYA6Nuclear transcription factor Y subunit A-6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVJ7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.