Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G198700.1 | Wheat | nucleus | 94.39 | 95.33 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 89.11 | 90.0 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 92.08 | 83.28 |
| Os07t0608200-01 | Rice | nucleus | 65.02 | 64.8 |
| Zm00001d022109_P003 | Maize | nucleus | 57.76 | 58.14 |
| Zm00001d006835_P002 | Maize | nucleus | 57.43 | 58.0 |
| EER99688 | Sorghum | nucleus | 56.44 | 56.81 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 44.22 | 46.53 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 42.9 | 44.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.89 | 42.63 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 43.23 | 41.32 |
| CDY69800 | Canola | nucleus | 29.04 | 38.1 |
| CDY26138 | Canola | nucleus | 29.37 | 37.87 |
| Bra014368.1-P | Field mustard | nucleus | 28.71 | 37.66 |
| KRH19255 | Soybean | nucleus | 28.71 | 37.34 |
| KRH37469 | Soybean | nucleus | 27.72 | 36.84 |
| CDY02477 | Canola | nucleus | 27.39 | 36.4 |
| KRH12475 | Soybean | nucleus | 27.39 | 36.4 |
| KRH02649 | Soybean | nucleus | 25.41 | 36.15 |
| PGSC0003DMT400055982 | Potato | nucleus | 25.41 | 35.65 |
| CDY56623 | Canola | nucleus | 27.39 | 35.47 |
| Bra037968.1-P | Field mustard | nucleus | 29.7 | 35.29 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 29.37 | 35.04 |
| Bra030899.1-P | Field mustard | nucleus | 28.38 | 34.26 |
| CDY48025 | Canola | nucleus | 32.01 | 33.33 |
| Bra008052.1-P | Field mustard | nucleus | 31.68 | 32.99 |
| CDY51397 | Canola | nucleus | 30.36 | 32.28 |
| CDY33084 | Canola | nucleus | 30.69 | 31.1 |
| KRH47551 | Soybean | nucleus | 35.64 | 31.03 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 21.45 | 30.95 |
| AT1G54160.1 | Thale cress | nucleus | 31.35 | 30.84 |
| CDX82133 | Canola | nucleus | 32.34 | 30.72 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 26.73 | 30.45 |
| KRH06120 | Soybean | nucleus | 32.01 | 30.41 |
| Bra016031.1-P | Field mustard | nucleus | 32.01 | 30.12 |
| CDX96435 | Canola | nucleus | 32.01 | 30.12 |
| Zm00001d026305_P002 | Maize | nucleus | 44.88 | 30.09 |
| KRH10071 | Soybean | nucleus | 29.37 | 29.97 |
| CDY39091 | Canola | nucleus | 30.36 | 29.87 |
| Bra021527.1-P | Field mustard | nucleus | 30.36 | 29.87 |
| Bra030996.1-P | Field mustard | mitochondrion | 20.79 | 29.86 |
| Solyc08g062210.2.1 | Tomato | nucleus | 32.01 | 29.85 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 23.43 | 29.58 |
| CDY33253 | Canola | nucleus | 29.7 | 29.22 |
| AT1G72830.2 | Thale cress | nucleus | 32.67 | 29.03 |
| CDX72950 | Canola | nucleus | 32.34 | 28.57 |
| AT3G14020.1 | Thale cress | nucleus | 29.04 | 28.57 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 31.68 | 28.57 |
| AT1G17590.3 | Thale cress | nucleus | 30.36 | 28.05 |
| CDY21741 | Canola | nucleus | 29.7 | 27.95 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 34.65 | 26.05 |
| CDY70458 | Canola | nucleus | 32.34 | 24.2 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 24.42 | 22.7 |
| CDY30854 | Canola | nucleus | 10.89 | 22.6 |
| CDX81837 | Canola | nucleus | 22.11 | 22.48 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 24.09 | 21.41 |
Protein Annotations
| MapMan:15.5.51.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 |
| InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF27 | SMART:SM00521 | EnsemblPlantsGene:TraesCS2A01G172500 | EnsemblPlants:TraesCS2A01G172500.1 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:129097888..129100296
Molecular Weight (calculated)
33077.9 Da
IEP (calculated)
10.106
GRAVY (calculated)
-0.709
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MCKMEDHPGH PISNYDFLSG NGVHTNKLVH KNYDRDSSSA KSGRSQQEAS ATSDSGLNEQ HTSRPSSQSD NDNDHGKPDQ HMVKPLLSLG NPETVAPPPM
101: LDCSQSFAYI PYTADAYAGI FPGYASHAIV HPQLNAATNS RVPLPVEPAA EEPMFVNAKQ YHAILRRRQI RAKLEAQNKL VKARKPYLHE SRHRHAMKRA
201: RGTGGRFLNT KQLEEQKQKQ ASGGASCTKV LGKNTLLQDS PAFAPSASAP ANVSSFSTIS MLANQERTCF PSVGFRPTVS FSALNGNGKL ATNGMHQRAS
301: MMR
101: LDCSQSFAYI PYTADAYAGI FPGYASHAIV HPQLNAATNS RVPLPVEPAA EEPMFVNAKQ YHAILRRRQI RAKLEAQNKL VKARKPYLHE SRHRHAMKRA
201: RGTGGRFLNT KQLEEQKQKQ ASGGASCTKV LGKNTLLQDS PAFAPSASAP ANVSSFSTIS MLANQERTCF PSVGFRPTVS FSALNGNGKL ATNGMHQRAS
301: MMR
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.