Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029489_P002 | Maize | nucleus | 15.48 | 57.78 |
| KRH47551 | Soybean | nucleus | 38.69 | 37.36 |
| KRH06120 | Soybean | nucleus | 33.33 | 35.11 |
| CDY48025 | Canola | nucleus | 30.36 | 35.05 |
| Bra008052.1-P | Field mustard | nucleus | 30.36 | 35.05 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 30.36 | 35.05 |
| KRH10071 | Soybean | nucleus | 30.95 | 35.02 |
| Os03t0174900-01 | Rice | vacuole | 21.13 | 33.97 |
| CDX82133 | Canola | nucleus | 32.14 | 33.86 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 28.87 | 33.68 |
| Bra016031.1-P | Field mustard | nucleus | 32.14 | 33.54 |
| CDX96435 | Canola | nucleus | 31.85 | 33.23 |
| PGSC0003DMT400006358 | Potato | nucleus | 27.98 | 33.22 |
| EER92762 | Sorghum | nucleus | 24.4 | 33.06 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 23.81 | 32.79 |
| Solyc03g121940.2.1 | Tomato | nucleus | 23.51 | 32.78 |
| Os07t0608200-01 | Rice | nucleus | 29.46 | 32.57 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 23.21 | 32.23 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 30.36 | 32.18 |
| EER94699 | Sorghum | nucleus | 29.46 | 32.04 |
| AT1G72830.2 | Thale cress | nucleus | 32.44 | 31.96 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 19.64 | 31.73 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 28.57 | 31.68 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 28.27 | 31.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.17 | 31.41 |
| AT1G17590.3 | Thale cress | nucleus | 30.65 | 31.4 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 27.98 | 31.33 |
| CDX72950 | Canola | nucleus | 31.85 | 31.2 |
| CDY21741 | Canola | nucleus | 29.76 | 31.06 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 37.2 | 31.02 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 23.21 | 30.71 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 23.21 | 30.59 |
| Os03t0411100-01 | Rice | nucleus | 28.27 | 29.97 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 22.62 | 29.92 |
| Bra030996.1-P | Field mustard | mitochondrion | 18.45 | 29.38 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 24.4 | 29.18 |
| Zm00001d022109_P003 | Maize | nucleus | 25.89 | 28.9 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 28.57 | 28.66 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 20.24 | 28.33 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 24.4 | 28.28 |
| Os02t0776400-01 | Rice | nucleus | 22.62 | 28.15 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 24.4 | 27.99 |
| OQU85816 | Sorghum | nucleus | 25.3 | 27.96 |
| EER99688 | Sorghum | nucleus | 24.7 | 27.57 |
| CDX81837 | Canola | nucleus | 23.51 | 26.51 |
| Zm00001d006835_P002 | Maize | nucleus | 23.51 | 26.33 |
| CDY70458 | Canola | nucleus | 31.55 | 26.17 |
| Zm00001d027874_P004 | Maize | nucleus | 19.94 | 25.48 |
| CDY30854 | Canola | nucleus | 10.42 | 23.97 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 21.13 | 23.2 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 22.62 | 23.17 |
| VIT_08s0007g08250.t01 | Wine grape | nucleus | 24.11 | 22.88 |
| VIT_13s0064g00860.t01 | Wine grape | nucleus | 26.19 | 21.73 |
| Zm00001d026305_P002 | Maize | nucleus | 19.94 | 14.82 |
Protein Annotations
| EntrezGene:100249800 | wikigene:100249800 | MapMan:15.5.51.1 | ProteinID:CBI35898 | ProteinID:CBI35898.3 | UniProt:D7TZV2 |
| EMBL:FN596494 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | EntrezGene:LOC100249800 | wikigene:LOC100249800 |
| InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 |
| SMART:SM00521 | UniParc:UPI0001983DCD | ArrayExpress:VIT_09s0002g01590 | EnsemblPlantsGene:VIT_09s0002g01590 | EnsemblPlants:VIT_09s0002g01590.t01 | unigene:Vvi.15185 |
| RefSeq:XP_002274458 | RefSeq:XP_002274458.1 | RefSeq:XP_010654479.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr9:+:1383432..1390944
Molecular Weight (calculated)
36911.2 Da
IEP (calculated)
9.327
GRAVY (calculated)
-0.779
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHLCKNDFH VNSARPTSPC DASSPHWWTS SETNTQQSSL PKFSRLKIGT QTIDYHSTKE LGSQVRDQDS PSTRSTGQSY PGVLHWGGNN THGQSIFSAH
101: LGYKETHGKP MVSIGNQDYL FTPSQVDCNQ LTARIPITAT EIYHCDLLAP AYGTKAMIHH PQMMGMAPSR VPLPVLNPQE EVIFINPKQY NGIMRRRKHR
201: AKLEAQTNPV KARKPYLHES RHLHALKRPR GAGGRFLNMS KLQEPKPSSP STDALIAGSA QPPFNGNTAS ESEVHQPENN REGASTTSCS DVTSGSNSDD
301: VFLQPEFRFS TYPPHIGGSM KRNDSGSNNL GGSGLG
101: LGYKETHGKP MVSIGNQDYL FTPSQVDCNQ LTARIPITAT EIYHCDLLAP AYGTKAMIHH PQMMGMAPSR VPLPVLNPQE EVIFINPKQY NGIMRRRKHR
201: AKLEAQTNPV KARKPYLHES RHLHALKRPR GAGGRFLNMS KLQEPKPSSP STDALIAGSA QPPFNGNTAS ESEVHQPENN REGASTTSCS DVTSGSNSDD
301: VFLQPEFRFS TYPPHIGGSM KRNDSGSNNL GGSGLG
001: MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
Arabidopsis Description
HAP2CNuclear factor Y, subunit A3 [Source:UniProtKB/TrEMBL;Acc:F4IEZ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.