Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 75.33 | 78.16 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 54.93 | 65.49 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 54.61 | 65.35 |
| Os02t0776400-01 | Rice | nucleus | 57.57 | 64.81 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 53.62 | 64.17 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 52.96 | 57.3 |
| EER92762 | Sorghum | nucleus | 30.92 | 37.9 |
| KRH37469 | Soybean | nucleus | 27.96 | 37.28 |
| KRH02649 | Soybean | nucleus | 25.99 | 37.09 |
| PGSC0003DMT400055982 | Potato | nucleus | 26.32 | 37.04 |
| KRH19255 | Soybean | nucleus | 27.96 | 36.48 |
| KRH12475 | Soybean | nucleus | 26.97 | 35.96 |
| EER94699 | Sorghum | nucleus | 34.21 | 33.66 |
| CDY69800 | Canola | nucleus | 25.33 | 33.33 |
| Bra014368.1-P | Field mustard | nucleus | 25.33 | 33.33 |
| Bra037968.1-P | Field mustard | nucleus | 27.3 | 32.55 |
| CDY02477 | Canola | nucleus | 24.34 | 32.46 |
| CDY26138 | Canola | nucleus | 25.0 | 32.34 |
| EER99688 | Sorghum | nucleus | 31.91 | 32.23 |
| CDY56623 | Canola | nucleus | 23.68 | 30.77 |
| Bra030899.1-P | Field mustard | nucleus | 25.33 | 30.68 |
| EES17387 | Sorghum | nucleus | 21.38 | 30.52 |
| CDY51397 | Canola | nucleus | 28.29 | 30.18 |
| Bra030996.1-P | Field mustard | mitochondrion | 20.39 | 29.38 |
| CDY33084 | Canola | nucleus | 28.62 | 29.1 |
| KXG37797 | Sorghum | nucleus | 25.0 | 28.46 |
| AT1G54160.1 | Thale cress | nucleus | 27.96 | 27.6 |
| KRH47551 | Soybean | nucleus | 31.58 | 27.59 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 21.71 | 27.5 |
| Solyc08g062210.2.1 | Tomato | nucleus | 29.28 | 27.38 |
| CDY39091 | Canola | nucleus | 27.63 | 27.27 |
| Bra021527.1-P | Field mustard | nucleus | 27.63 | 27.27 |
| CDY33253 | Canola | nucleus | 27.3 | 26.95 |
| KRH10071 | Soybean | nucleus | 26.32 | 26.94 |
| Bra008052.1-P | Field mustard | nucleus | 25.66 | 26.8 |
| CDY48025 | Canola | nucleus | 25.66 | 26.8 |
| AT3G14020.1 | Thale cress | nucleus | 26.64 | 26.3 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 27.96 | 25.3 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 32.57 | 24.57 |
| CDX82133 | Canola | nucleus | 25.66 | 24.45 |
| KRH06120 | Soybean | nucleus | 25.66 | 24.45 |
| CDX96435 | Canola | nucleus | 25.66 | 24.22 |
| Bra016031.1-P | Field mustard | nucleus | 25.66 | 24.22 |
| AT1G17590.3 | Thale cress | nucleus | 25.66 | 23.78 |
| CDY21741 | Canola | nucleus | 24.34 | 22.98 |
| CDX72950 | Canola | nucleus | 25.33 | 22.45 |
| AT1G72830.2 | Thale cress | nucleus | 25.0 | 22.29 |
| KXG37939 | Sorghum | nucleus | 24.67 | 21.74 |
| CDY30854 | Canola | nucleus | 10.2 | 21.23 |
| CDY70458 | Canola | nucleus | 26.32 | 19.75 |
| CDX81837 | Canola | nucleus | 17.43 | 17.79 |
| OQU88458 | Sorghum | nucleus | 18.75 | 17.65 |
| OQU79642 | Sorghum | plastid | 23.03 | 16.71 |
Protein Annotations
| MapMan:15.5.51.1 | UniProt:A0A1Z5RQZ6 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | InterPro:NFYA |
| EnsemblPlants:OQU85816 | ProteinID:OQU85816 | ProteinID:OQU85816.1 | PFAM:PF02045 | PRINTS:PR00616 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF10 | SMART:SM00521 | EnsemblPlantsGene:SORBI_3004G316500 | UniParc:UPI000B4256E7 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:-:65234106..65238311
Molecular Weight (calculated)
33131.0 Da
IEP (calculated)
11.562
GRAVY (calculated)
-0.751
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPKGPDQRK GRQGGGKAQT QRTAFAWRTH RGRRVGAMLL PSSSSSPASK GNSFGNTVND HMRSTLSFDN KQSPFASQNI DYGQTIACIS YPYNHSGSGG
101: VWAAYESGTT ATTVFHSQIS GGGARIPLPL ELAENEPIYV NPKQYHGILR RRQLRAKLEA QNKLVKARKP YLHESRHLHA MKRARGSGGR FLNTKQFQQQ
201: QQSHTASTRS TTNGTSSSGS THLRLGGGAA GDRSMLAPKT MASQDSSKKA VSSALAFTVT PMLHRDDAFL QHPSHYLSFS GHFGQASVQA GMHNGSQHRV
301: PFMR
101: VWAAYESGTT ATTVFHSQIS GGGARIPLPL ELAENEPIYV NPKQYHGILR RRQLRAKLEA QNKLVKARKP YLHESRHLHA MKRARGSGGR FLNTKQFQQQ
201: QQSHTASTRS TTNGTSSSGS THLRLGGGAA GDRSMLAPKT MASQDSSKKA VSSALAFTVT PMLHRDDAFL QHPSHYLSFS GHFGQASVQA GMHNGSQHRV
301: PFMR
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.