Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37469 | Soybean | nucleus | 92.54 | 92.54 |
| KRH02649 | Soybean | nucleus | 67.54 | 72.3 |
| KRH19255 | Soybean | nucleus | 71.05 | 69.53 |
| Zm00001d029489_P002 | Maize | nucleus | 24.56 | 62.22 |
| Solyc12g009050.1.1 | Tomato | nucleus | 45.61 | 41.11 |
| Os03t0174900-01 | Rice | vacuole | 34.65 | 37.8 |
| EER92762 | Sorghum | nucleus | 37.28 | 34.27 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 36.4 | 32.68 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 41.67 | 32.65 |
| PGSC0003DMT400000740 | Potato | nucleus | 42.98 | 32.56 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 36.4 | 32.55 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 35.96 | 32.28 |
| Os02t0776400-01 | Rice | nucleus | 38.16 | 32.22 |
| KRH42997 | Soybean | nucleus | 28.95 | 32.04 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 33.77 | 31.82 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 33.77 | 31.56 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 39.04 | 30.9 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 54.39 | 30.77 |
| KRH11777 | Soybean | nucleus | 27.63 | 30.73 |
| KRH59113 | Soybean | nucleus | 28.51 | 29.95 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 36.84 | 29.89 |
| KRH36784 | Soybean | nucleus | 28.07 | 29.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.91 | 29.17 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 37.28 | 29.01 |
| Zm00001d022109_P003 | Maize | nucleus | 37.28 | 28.24 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 39.04 | 28.08 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 36.84 | 28.0 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 36.84 | 28.0 |
| EER99688 | Sorghum | nucleus | 36.84 | 27.91 |
| Zm00001d006835_P002 | Maize | nucleus | 36.4 | 27.67 |
| EER94699 | Sorghum | nucleus | 37.28 | 27.51 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 36.4 | 27.39 |
| Os07t0608200-01 | Rice | nucleus | 36.4 | 27.3 |
| OQU85816 | Sorghum | nucleus | 35.96 | 26.97 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 33.77 | 26.55 |
| Os03t0411100-01 | Rice | nucleus | 36.4 | 26.18 |
| KRH06120 | Soybean | nucleus | 36.4 | 26.02 |
| KRH47551 | Soybean | nucleus | 39.47 | 25.86 |
| Zm00001d027874_P004 | Maize | nucleus | 29.39 | 25.48 |
| KRH10071 | Soybean | nucleus | 32.89 | 25.25 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 36.84 | 25.07 |
| KRH27472 | Soybean | nucleus | 30.7 | 23.1 |
| KRH20817 | Soybean | nucleus | 30.7 | 23.03 |
| KRH73967 | Soybean | nucleus | 29.82 | 22.15 |
| KRH14162 | Soybean | nucleus | 28.95 | 21.5 |
| KRH46473 | Soybean | nucleus | 31.58 | 21.43 |
| KRH32866 | Soybean | nucleus | 30.26 | 21.1 |
| KRG98391 | Soybean | nucleus | 31.14 | 21.01 |
| KRH72156 | Soybean | nucleus | 30.7 | 20.9 |
| KRH68018 | Soybean | nucleus | 29.82 | 20.73 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 30.26 | 19.94 |
| Zm00001d026305_P002 | Maize | nucleus | 26.32 | 13.27 |
Protein Annotations
| MapMan:15.5.51.1 | EMBL:ACUP02009321 | InterPro:CCAAT-binding_factor_CS | EnsemblPlantsGene:GLYMA_15G173300 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016602 | UniProt:I1MHB5 | InterPro:IPR001289 | EnsemblPlants:KRH12475 | ProteinID:KRH12475 |
| ProteinID:KRH12475.1 | ProteinID:KRH12476.1 | ProteinID:KRH12477.1 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 |
| ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 | SMART:SM00521 | UniParc:UPI000152A2D7 |
Description
hypothetical protein
Coordinates
chr15:-:15893875..15902960
Molecular Weight (calculated)
25189.8 Da
IEP (calculated)
9.397
GRAVY (calculated)
-0.598
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQFLFLNLP DTEINCSQVD CNHSMAHSSY PYGDPILAYG PQAISHPQMV PQMLGLASTR VALPLDLAED GPIYVNAKQY HGILRRRQSR AKLEAQNKLI
101: KSRKPYLHES RHRHALNRVR GSGGRFLSTK QLAQSNAEFV TGAHSGSDPT NIYQKEHPLE VESHSSKDGD NASFITTYSD RPCLSGNNLN FRQQECMFLG
201: NSANMSGAPQ CSGGLTFGGA KQRTSVVR
101: KSRKPYLHES RHRHALNRVR GSGGRFLSTK QLAQSNAEFV TGAHSGSDPT NIYQKEHPLE VESHSSKDGD NASFITTYSD RPCLSGNNLN FRQQECMFLG
201: NSANMSGAPQ CSGGLTFGGA KQRTSVVR
001: MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
Arabidopsis Description
HAP2CNuclear factor Y, subunit A3 [Source:UniProtKB/TrEMBL;Acc:F4IEZ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.