Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14162 | Soybean | nucleus | 94.46 | 94.46 |
| KRG98391 | Soybean | nucleus | 72.64 | 65.98 |
| KRH46473 | Soybean | nucleus | 71.66 | 65.48 |
| Bra023913.1-P | Field mustard | nucleus | 34.2 | 58.33 |
| CDY37330 | Canola | nucleus | 34.2 | 58.33 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 51.14 | 51.31 |
| CDX82223 | Canola | nucleus | 42.02 | 46.07 |
| AT3G20910.1 | Thale cress | nucleus | 44.63 | 45.21 |
| CDY06393 | Canola | nucleus | 43.32 | 44.63 |
| AT5G12840.3 | Thale cress | nucleus | 39.41 | 44.49 |
| Bra031242.1-P | Field mustard | nucleus | 42.67 | 44.41 |
| Bra006165.1-P | Field mustard | nucleus | 36.16 | 43.7 |
| CDX78492 | Canola | nucleus | 28.99 | 43.41 |
| CDX70480 | Canola | nucleus | 36.48 | 43.24 |
| PGSC0003DMT400018959 | Potato | nucleus | 42.02 | 43.0 |
| CDY32398 | Canola | nucleus | 41.69 | 42.95 |
| Solyc11g065700.1.1 | Tomato | nucleus | 41.69 | 42.67 |
| CDY19591 | Canola | nucleus | 40.72 | 42.52 |
| CDX97206 | Canola | nucleus | 38.76 | 41.75 |
| Bra001806.1-P | Field mustard | nucleus | 41.69 | 41.56 |
| Bra008878.1-P | Field mustard | nucleus | 38.11 | 41.34 |
| PGSC0003DMT400027785 | Potato | nucleus | 41.04 | 40.65 |
| CDY53967 | Canola | nucleus | 37.46 | 40.49 |
| Solyc01g008490.2.1 | Tomato | nucleus | 41.04 | 40.38 |
| Bra023378.1-P | Field mustard | nucleus | 30.62 | 39.17 |
| CDX85686 | Canola | nucleus | 29.97 | 38.98 |
| CDX91161 | Canola | nucleus | 27.69 | 38.81 |
| KRH27472 | Soybean | nucleus | 35.18 | 35.64 |
| KRH20817 | Soybean | nucleus | 35.18 | 35.53 |
| Os03t0696300-01 | Rice | nucleus | 28.99 | 34.23 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 27.69 | 31.95 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 27.69 | 31.95 |
| Zm00001d033602_P002 | Maize | nucleus | 27.04 | 31.44 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 32.57 | 31.25 |
| KXG37797 | Sorghum | nucleus | 27.04 | 31.09 |
| KRH42997 | Soybean | nucleus | 20.85 | 31.07 |
| KRH37469 | Soybean | nucleus | 22.48 | 30.26 |
| KRH11777 | Soybean | nucleus | 20.2 | 30.24 |
| KRH12475 | Soybean | nucleus | 22.15 | 29.82 |
| KRH19255 | Soybean | nucleus | 22.48 | 29.61 |
| KRH02649 | Soybean | nucleus | 20.52 | 29.58 |
| KRH59113 | Soybean | nucleus | 20.52 | 29.03 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 28.01 | 28.86 |
| KRH36784 | Soybean | nucleus | 20.2 | 28.31 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 33.22 | 27.87 |
| KRH10071 | Soybean | nucleus | 23.45 | 24.24 |
| KRH47551 | Soybean | nucleus | 26.38 | 23.28 |
| KRH06120 | Soybean | nucleus | 23.13 | 22.26 |
| KRH68018 | Soybean | nucleus | 23.78 | 22.26 |
| KRH72156 | Soybean | nucleus | 23.78 | 21.79 |
| KRH32866 | Soybean | nucleus | 22.48 | 21.1 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 22.48 | 19.94 |
Protein Annotations
| EntrezGene:102664020 | MapMan:15.5.51.1 | EMBL:ACUP02001291 | EMBL:BT095457 | UniProt:C6TD07 | InterPro:CCAAT-binding_factor_CS |
| EnsemblPlantsGene:GLYMA_02G303800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 |
| EnsemblPlants:KRH73967 | ProteinID:KRH73967 | ProteinID:KRH73967.1 | ProteinID:KRH73968.1 | ProteinID:KRH73969.1 | ProteinID:KRH73970.1 |
| InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF14 | SMART:SM00521 | UniParc:UPI000152A26D | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:-:47896772..47898862
Molecular Weight (calculated)
34101.3 Da
IEP (calculated)
7.417
GRAVY (calculated)
-0.970
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSKSETANQ LRSDPHSFTP NNAYSEPWWR GIQYNPVPQA MLGVNASNSS SLERPNGDSE SSEEDDDATK ESQPTAPNQS GNYGQDHQAM QHSSSSAPLV
101: RDDCLTQAPQ VELVGHSIGY TPFIGMPHAR MALPLEMAQE PVYVNAKQYQ GILRRRQARA KAELEKKLIK VRKPYLHESR HQHAIRRARG NGGRFAKKTE
201: VEASNHMNKE KDMGTGQVPL SRSISSSGFG SLPSDSAETW NSPSVQQDAR GSQVHERFEE RNYANVLQSS STFCLHSGER VEEGDCSGQQ RGSILSEHTS
301: QRRLAIQ
101: RDDCLTQAPQ VELVGHSIGY TPFIGMPHAR MALPLEMAQE PVYVNAKQYQ GILRRRQARA KAELEKKLIK VRKPYLHESR HQHAIRRARG NGGRFAKKTE
201: VEASNHMNKE KDMGTGQVPL SRSISSSGFG SLPSDSAETW NSPSVQQDAR GSQVHERFEE RNYANVLQSS STFCLHSGER VEEGDCSGQQ RGSILSEHTS
301: QRRLAIQ
001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
Arabidopsis Description
NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.