Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19591 | Canola | nucleus | 95.59 | 95.92 |
| CDY06393 | Canola | nucleus | 95.59 | 94.63 |
| Bra023913.1-P | Field mustard | nucleus | 47.46 | 77.78 |
| Bra001806.1-P | Field mustard | nucleus | 80.0 | 76.62 |
| AT3G20910.1 | Thale cress | nucleus | 76.27 | 74.26 |
| KRH14162 | Soybean | nucleus | 45.08 | 43.32 |
| KRH73967 | Soybean | nucleus | 44.41 | 42.67 |
| KRG98391 | Soybean | nucleus | 47.8 | 41.72 |
| KRH46473 | Soybean | nucleus | 46.78 | 41.07 |
| Bra023378.1-P | Field mustard | nucleus | 32.88 | 40.42 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 41.36 | 39.87 |
| Bra006165.1-P | Field mustard | nucleus | 33.56 | 38.98 |
| Bra008878.1-P | Field mustard | nucleus | 36.61 | 38.16 |
| PGSC0003DMT400018959 | Potato | nucleus | 36.61 | 36.0 |
| Solyc11g065700.1.1 | Tomato | nucleus | 36.27 | 35.67 |
| PGSC0003DMT400027785 | Potato | nucleus | 36.95 | 35.16 |
| Solyc01g008490.2.1 | Tomato | nucleus | 36.61 | 34.62 |
| Os03t0696300-01 | Rice | nucleus | 30.17 | 34.23 |
| Bra032395.1-P | Field mustard | nucleus | 20.34 | 32.79 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 29.49 | 32.71 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 29.15 | 32.33 |
| Zm00001d033602_P002 | Maize | nucleus | 28.81 | 32.2 |
| Bra005397.1-P | Field mustard | nucleus | 20.68 | 30.96 |
| KXG37797 | Sorghum | nucleus | 27.8 | 30.71 |
| Bra014368.1-P | Field mustard | nucleus | 22.71 | 29.0 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 30.85 | 28.44 |
| Bra030899.1-P | Field mustard | nucleus | 23.73 | 27.89 |
| Bra037968.1-P | Field mustard | nucleus | 24.07 | 27.84 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 27.46 | 27.18 |
| Bra030996.1-P | Field mustard | mitochondrion | 18.31 | 25.59 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 31.19 | 25.14 |
| Bra008052.1-P | Field mustard | nucleus | 24.41 | 24.74 |
| Bra021527.1-P | Field mustard | nucleus | 24.75 | 23.7 |
| Bra016031.1-P | Field mustard | nucleus | 25.08 | 22.98 |
| Bra009200.1-P | Field mustard | nucleus | 20.68 | 22.85 |
| Bra040529.1-P | Field mustard | nucleus | 21.02 | 22.06 |
| Bra001164.1-P | Field mustard | nucleus | 20.34 | 21.35 |
Protein Annotations
| MapMan:15.5.51.1 | EnsemblPlantsGene:Bra031242 | EnsemblPlants:Bra031242.1 | EnsemblPlants:Bra031242.1-P | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | UniProt:M4ER19 | InterPro:NFYA |
| PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF14 |
| SMART:SM00521 | UniParc:UPI0002547927 | SEG:seg | : | : | : |
Description
AT3G20910 (E=4e-112) NF-YA9 | NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor
Coordinates
chrA05:-:16738881..16740312
Molecular Weight (calculated)
32630.7 Da
IEP (calculated)
8.457
GRAVY (calculated)
-1.082
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSKPDGGNQ IVSEAVHHHS INSLNPWQRA AAAACNASSL VEEAVEKSIA LESQDNWEST NGSKSPSHKD ENGNKESPQV TISPQESAGD YSEKSQELVH
101: VGVTGPPHPQ PVSHTVGWAS SNPYQDPYYA GMMGAYPMAY VPYGGMPHSR MPLPPEVAQE PVYVNAKQYQ AILRRRQARA KAELEMKLIK SRKPYLHESR
201: HQHAMRRPRG TGGRFAKKTN TEASKPKPGE KNNATQSPTS SHSDQPEAWN DECRKQSEEM QSSASKRREE AEDCSGQQWN SISSNHTSQA RLAIK
101: VGVTGPPHPQ PVSHTVGWAS SNPYQDPYYA GMMGAYPMAY VPYGGMPHSR MPLPPEVAQE PVYVNAKQYQ AILRRRQARA KAELEMKLIK SRKPYLHESR
201: HQHAMRRPRG TGGRFAKKTN TEASKPKPGE KNNATQSPTS SHSDQPEAWN DECRKQSEEM QSSASKRREE AEDCSGQQWN SISSNHTSQA RLAIK
001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
Arabidopsis Description
NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.