Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98391 | Soybean | nucleus | 96.43 | 95.86 |
| KRH73967 | Soybean | nucleus | 65.48 | 71.66 |
| KRH14162 | Soybean | nucleus | 63.69 | 69.71 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 53.57 | 58.82 |
| CDX78492 | Canola | nucleus | 33.63 | 55.12 |
| CDY37330 | Canola | nucleus | 28.87 | 53.89 |
| Bra023913.1-P | Field mustard | nucleus | 28.87 | 53.89 |
| AT5G12840.3 | Thale cress | nucleus | 43.45 | 53.68 |
| PGSC0003DMT400018959 | Potato | nucleus | 47.32 | 53.0 |
| CDX70480 | Canola | nucleus | 40.77 | 52.9 |
| Solyc11g065700.1.1 | Tomato | nucleus | 47.02 | 52.67 |
| Bra006165.1-P | Field mustard | nucleus | 39.29 | 51.97 |
| Bra008878.1-P | Field mustard | nucleus | 42.86 | 50.88 |
| CDX97206 | Canola | nucleus | 43.15 | 50.88 |
| CDX85686 | Canola | nucleus | 35.42 | 50.42 |
| CDY53967 | Canola | nucleus | 42.26 | 50.0 |
| CDX82223 | Canola | nucleus | 41.37 | 49.64 |
| AT3G20910.1 | Thale cress | nucleus | 44.64 | 49.51 |
| PGSC0003DMT400027785 | Potato | nucleus | 45.54 | 49.35 |
| Bra023378.1-P | Field mustard | nucleus | 35.12 | 49.17 |
| Solyc01g008490.2.1 | Tomato | nucleus | 45.24 | 48.72 |
| CDY06393 | Canola | nucleus | 42.26 | 47.65 |
| CDX91161 | Canola | nucleus | 30.65 | 47.03 |
| Bra031242.1-P | Field mustard | nucleus | 41.07 | 46.78 |
| CDY32398 | Canola | nucleus | 41.37 | 46.64 |
| CDY19591 | Canola | nucleus | 39.58 | 45.24 |
| Bra001806.1-P | Field mustard | nucleus | 41.07 | 44.81 |
| KRH27472 | Soybean | nucleus | 36.9 | 40.92 |
| KRH20817 | Soybean | nucleus | 35.42 | 39.14 |
| Os03t0696300-01 | Rice | nucleus | 30.06 | 38.85 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 30.36 | 38.35 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 30.06 | 37.97 |
| Zm00001d033602_P002 | Maize | nucleus | 29.76 | 37.88 |
| KXG37797 | Sorghum | nucleus | 29.76 | 37.45 |
| KRH11777 | Soybean | nucleus | 22.62 | 37.07 |
| KRH42997 | Soybean | nucleus | 22.32 | 36.41 |
| KRH59113 | Soybean | nucleus | 22.62 | 35.02 |
| KRH36784 | Soybean | nucleus | 22.62 | 34.7 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 32.74 | 34.38 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 29.76 | 33.56 |
| KRH02649 | Soybean | nucleus | 20.54 | 32.39 |
| KRH37469 | Soybean | nucleus | 21.73 | 32.02 |
| KRH19255 | Soybean | nucleus | 22.02 | 31.76 |
| KRH12475 | Soybean | nucleus | 21.43 | 31.58 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 33.33 | 30.6 |
| KRH10071 | Soybean | nucleus | 23.51 | 26.6 |
| KRH68018 | Soybean | nucleus | 25.0 | 25.61 |
| KRH72156 | Soybean | nucleus | 25.3 | 25.37 |
| KRH47551 | Soybean | nucleus | 26.19 | 25.29 |
| KRH06120 | Soybean | nucleus | 23.81 | 25.08 |
| KRH32866 | Soybean | nucleus | 23.51 | 24.16 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 23.81 | 23.12 |
Protein Annotations
| EntrezGene:100783581 | MapMan:15.5.51.1 | EMBL:ACUP02005345 | InterPro:CCAAT-binding_factor_CS | EnsemblPlantsGene:GLYMA_08G335900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | UniProt:I1KYS9 | InterPro:IPR001289 | EnsemblPlants:KRH46473 |
| ProteinID:KRH46473 | ProteinID:KRH46473.1 | ProteinID:KRH46474.1 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 |
| ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF14 | SMART:SM00521 | UniParc:UPI0002338F9B |
Description
hypothetical protein
Coordinates
chr8:+:45296401..45300419
Molecular Weight (calculated)
37065.3 Da
IEP (calculated)
6.565
GRAVY (calculated)
-1.145
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSKSETANR LRSDPHSFQP GGVYSEPWWR GIGYNPMAQT MAGANASNSS SLECPNGDSE SNEEGQSLSN SGMNEEDDDA TKDSKPAAPN ETGNYEQEQQ
101: GMQHTASSPP SMREECLTQT PQLELVGHSI ACSTNPYQDP YYGGMMAAYG HQQLGYAPFI GMPHARMPLP LEMAQEPVYV NAKQYQGILR RRQARAKAEL
201: ERKLIKSRKP YLHESRHQHA MRRARGTGGR FAKKTDGEGS NHLGKEKDNG TDSVQSISSS GSEPLHSDSA ETWNSPNMQQ DARASKVHNS RFEAPSYQNG
301: SGSYHNHNGL QSSVYHSSSG ERVEERDCSG QQLNHN
101: GMQHTASSPP SMREECLTQT PQLELVGHSI ACSTNPYQDP YYGGMMAAYG HQQLGYAPFI GMPHARMPLP LEMAQEPVYV NAKQYQGILR RRQARAKAEL
201: ERKLIKSRKP YLHESRHQHA MRRARGTGGR FAKKTDGEGS NHLGKEKDNG TDSVQSISSS GSEPLHSDSA ETWNSPNMQQ DARASKVHNS RFEAPSYQNG
301: SGSYHNHNGL QSSVYHSSSG ERVEERDCSG QQLNHN
001: MQSKPGRENE EEVNNHHAVQ QPMMYAEPWW KNNSFGVVPQ ARPSGIPSNS SSLDCPNGSE SNDVHSASED GALNGENDGT WKDSQAATSS RSDNHGMEGN
101: DPALSIRNMH DQPLVQPPEL VGHYIACVPN PYQDPYYGGL MGAYGHQQLG FRPYLGMPRE RTALPLDMAQ EPVYVNAKQY EGILRRRKAR AKAELERKVI
201: RDRKPYLHES RHKHAMRRAR ASGGRFAKKS EVEAGEDAGG RDRERGSATN SSGSEQVETD SNETLNSSGA P
101: DPALSIRNMH DQPLVQPPEL VGHYIACVPN PYQDPYYGGL MGAYGHQQLG FRPYLGMPRE RTALPLDMAQ EPVYVNAKQY EGILRRRKAR AKAELERKVI
201: RDRKPYLHES RHKHAMRRAR ASGGRFAKKS EVEAGEDAGG RDRERGSATN SSGSEQVETD SNETLNSSGA P
Arabidopsis Description
NFYA1Nuclear transcription factor Y subunit A-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.