Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11777 | Soybean | nucleus | 88.13 | 94.15 |
| KRH42997 | Soybean | nucleus | 76.26 | 81.07 |
| KRH59113 | Soybean | nucleus | 75.8 | 76.5 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 69.86 | 73.56 |
| Solyc02g069860.2.1 | Tomato | nucleus | 57.99 | 61.06 |
| PGSC0003DMT400030813 | Potato | nucleus | 56.16 | 60.89 |
| PGSC0003DMT400054416 | Potato | nucleus | 57.53 | 60.0 |
| AT1G30500.2 | Thale cress | nucleus | 49.32 | 56.84 |
| Bra032395.1-P | Field mustard | nucleus | 47.03 | 56.28 |
| CDY02298 | Canola | nucleus | 46.58 | 55.74 |
| CDY09571 | Canola | nucleus | 46.12 | 55.19 |
| AT2G34720.1 | Thale cress | nucleus | 47.03 | 52.02 |
| CDX84285 | Canola | nucleus | 43.84 | 48.98 |
| Bra005397.1-P | Field mustard | nucleus | 43.38 | 48.22 |
| CDY31636 | Canola | nucleus | 43.38 | 48.22 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 49.77 | 46.58 |
| HORVU0Hr1G010230.1 | Barley | nucleus | 33.79 | 46.54 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 47.95 | 46.05 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 45.66 | 42.73 |
| Os08t0196700-01 | Rice | nucleus | 37.44 | 42.49 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 39.73 | 41.23 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 39.27 | 40.95 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 38.36 | 40.58 |
| Os12t0613000-01 | Rice | nucleus | 40.18 | 40.55 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 38.81 | 39.72 |
| EES17387 | Sorghum | nucleus | 37.9 | 38.97 |
| KRH02649 | Soybean | nucleus | 29.22 | 30.05 |
| Zm00001d041491_P001 | Maize | nucleus | 37.44 | 28.37 |
| KRH37469 | Soybean | nucleus | 29.22 | 28.07 |
| KRH12475 | Soybean | nucleus | 29.22 | 28.07 |
| KRH27472 | Soybean | nucleus | 38.81 | 28.05 |
| KRH20817 | Soybean | nucleus | 38.36 | 27.63 |
| KRH19255 | Soybean | nucleus | 29.22 | 27.47 |
| KRG98391 | Soybean | nucleus | 35.16 | 22.78 |
| KRH46473 | Soybean | nucleus | 34.7 | 22.62 |
| KRH06120 | Soybean | nucleus | 30.59 | 21.0 |
| KRH10071 | Soybean | nucleus | 28.31 | 20.88 |
| KRH72156 | Soybean | nucleus | 31.51 | 20.6 |
| KRH14162 | Soybean | nucleus | 28.77 | 20.52 |
| KRH73967 | Soybean | nucleus | 28.31 | 20.2 |
| KRH32866 | Soybean | nucleus | 30.14 | 20.18 |
| KRH47551 | Soybean | nucleus | 31.96 | 20.11 |
| KRH68018 | Soybean | nucleus | 29.68 | 19.82 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 27.85 | 17.63 |
Protein Annotations
| EntrezGene:100784325 | MapMan:15.5.51.1 | EMBL:ACUP02005397 | InterPro:CCAAT-binding_factor_CS | EnsemblPlantsGene:GLYMA_09G023800 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | UniProt:K7LBF6 | ProteinID:KRH36783.1 |
| EnsemblPlants:KRH36784 | ProteinID:KRH36784 | ProteinID:KRH36784.1 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 |
| ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF18 | SMART:SM00521 | UniParc:UPI0001BA46E9 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:1935936..1941604
Molecular Weight (calculated)
24485.3 Da
IEP (calculated)
6.083
GRAVY (calculated)
-0.891
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MCVDWDTVLH VNQEIMTSTH DLSDNEADDQ QQSESQMEPL SANGISYAGI ATQNVQYATP SQLGTGHAVV PPTYPYPDPY YRSIFAPYDA QTYPPQPYGG
101: NPMVHLQLMG IQQAGVPLPT DTVEEPVFVN AKQYHGILRR RQSRAKAESE KKAARNRKPY LHESRHLHAL RRARGCGGRF LNSKKDENQQ DEVASTDESQ
201: STINLNSDKN ELAPSDRTS
101: NPMVHLQLMG IQQAGVPLPT DTVEEPVFVN AKQYHGILRR RQSRAKAESE KKAARNRKPY LHESRHLHAL RRARGCGGRF LNSKKDENQQ DEVASTDESQ
201: STINLNSDKN ELAPSDRTS
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.