Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g069860.2.1 | Tomato | nucleus | 95.24 | 96.15 |
| PGSC0003DMT400030813 | Potato | nucleus | 74.76 | 77.72 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 68.1 | 68.75 |
| KRH11777 | Soybean | nucleus | 61.43 | 62.93 |
| KRH42997 | Soybean | nucleus | 60.0 | 61.16 |
| AT1G30500.2 | Thale cress | nucleus | 52.86 | 58.42 |
| KRH36784 | Soybean | nucleus | 60.0 | 57.53 |
| KRH59113 | Soybean | nucleus | 59.05 | 57.14 |
| Bra032395.1-P | Field mustard | nucleus | 47.14 | 54.1 |
| CDY02298 | Canola | nucleus | 46.67 | 53.55 |
| CDY09571 | Canola | nucleus | 46.67 | 53.55 |
| HORVU0Hr1G010230.1 | Barley | nucleus | 39.05 | 51.57 |
| AT2G34720.1 | Thale cress | nucleus | 46.67 | 49.49 |
| CDX84285 | Canola | nucleus | 42.86 | 45.92 |
| CDY31636 | Canola | nucleus | 42.86 | 45.69 |
| Bra005397.1-P | Field mustard | nucleus | 42.86 | 45.69 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 44.76 | 44.55 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 44.29 | 44.29 |
| EES17387 | Sorghum | nucleus | 44.76 | 44.13 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 44.76 | 43.93 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 48.57 | 43.59 |
| Os08t0196700-01 | Rice | nucleus | 40.0 | 43.52 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 42.38 | 43.0 |
| Os12t0613000-01 | Rice | nucleus | 44.29 | 42.86 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 44.76 | 41.23 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 42.38 | 38.03 |
| Zm00001d041491_P001 | Maize | nucleus | 42.86 | 31.14 |
| PGSC0003DMT400072322 | Potato | nucleus | 24.29 | 26.02 |
| PGSC0003DMT400021053 | Potato | nucleus | 28.57 | 25.0 |
| PGSC0003DMT400055982 | Potato | nucleus | 25.24 | 24.54 |
| PGSC0003DMT400017698 | Potato | nucleus | 35.24 | 24.42 |
| PGSC0003DMT400027785 | Potato | nucleus | 35.71 | 24.19 |
| PGSC0003DMT400006358 | Potato | nucleus | 32.38 | 24.03 |
| PGSC0003DMT400018959 | Potato | nucleus | 32.86 | 23.0 |
| PGSC0003DMT400000740 | Potato | nucleus | 30.95 | 21.59 |
| PGSC0003DMT400055061 | Potato | nucleus | 30.48 | 20.58 |
Protein Annotations
| EntrezGene:102600275 | MapMan:15.5.51.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | UniProt:M1BWA7 |
| InterPro:NFYA | PFAM:PF02045 | EnsemblPlantsGene:PGSC0003DMG401021124 | PGSC:PGSC0003DMG401021124 | EnsemblPlants:PGSC0003DMT400054416 | PRINTS:PR00616 |
| PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF18 | SMART:SM00521 | UniParc:UPI00029483E0 | RefSeq:XP_006353014.1 |
| SEG:seg | : | : | : | : | : |
Description
Nuclear transcription factor Y subunit A-4 [Source:PGSC_GENE;Acc:PGSC0003DMG401021124]
Coordinates
chr2:-:28992475..28998586
Molecular Weight (calculated)
23217.0 Da
IEP (calculated)
7.862
GRAVY (calculated)
-0.885
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSLHYHSD GSENEQSENQ SEAHSESSSP AAGMSVPGTV TPNMHYVMPN LLGNGNSMIQ AQTAYPYPDP YYRSIFAPYD AQPYPPQPYP AQPMVHVQLM
101: GIQQAGVPLP SDAIDEPVFV NAKQYHGILR RRQSRAKADS EKKLLKARKP YLHESRHLHA LKRARGCGGR FLTAKETDNQ QKQDESGDKS HVNINLESGK
201: DKVASSENAS
101: GIQQAGVPLP SDAIDEPVFV NAKQYHGILR RRQSRAKADS EKKLLKARKP YLHESRHLHA LKRARGCGGR FLTAKETDNQ QKQDESGDKS HVNINLESGK
201: DKVASSENAS
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.