Factsheet for Bra001806.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82223	Canola	nucleus	90.58	99.64
Bra031242.1-P	Field mustard	nucleus	76.62	80.0
Bra023913.1-P	Field mustard	nucleus	44.48	76.11
AT3G20910.1	Thale cress	nucleus	72.73	73.93
KRH14162	Soybean	nucleus	41.88	42.02
KRG98391	Soybean	nucleus	45.78	41.72
KRH73967	Soybean	nucleus	41.56	41.69
Bra023378.1-P	Field mustard	nucleus	32.47	41.67
KRH46473	Soybean	nucleus	44.81	41.07
VIT_06s0004g02270.t01	Wine grape	nucleus	38.31	38.56
Bra008878.1-P	Field mustard	nucleus	34.42	37.46
Bra006165.1-P	Field mustard	nucleus	30.84	37.4
PGSC0003DMT400018959	Potato	nucleus	35.06	36.0
Solyc11g065700.1.1	Tomato	nucleus	34.42	35.33
PGSC0003DMT400027785	Potato	nucleus	35.06	34.84
Solyc01g008490.2.1	Tomato	nucleus	35.06	34.62
Os03t0696300-01	Rice	nucleus	28.25	33.46
TraesCS4A01G277300.1	Wheat	nucleus	27.92	32.33
TraesCS4D01G033700.1	Wheat	nucleus	27.6	31.95
Bra032395.1-P	Field mustard	nucleus	18.51	31.15
Zm00001d033602_P002	Maize	nucleus	26.62	31.06
KXG37797	Sorghum	nucleus	25.65	29.59
Bra005397.1-P	Field mustard	nucleus	18.83	29.44
Bra014368.1-P	Field mustard	nucleus	21.43	28.57
GSMUA_Achr3P29730_001	Banana	nucleus	28.57	27.5
Bra037968.1-P	Field mustard	nucleus	22.4	27.06
Bra030899.1-P	Field mustard	nucleus	21.75	26.69
GSMUA_Achr4P03600_001	Banana	nucleus	25.65	26.51
Bra008052.1-P	Field mustard	nucleus	23.38	24.74
Bra030996.1-P	Field mustard	mitochondrion	16.88	24.64
GSMUA_Achr4P11090_001	Banana	vacuole	28.57	24.04
Bra016031.1-P	Field mustard	nucleus	24.35	23.29
Bra009200.1-P	Field mustard	nucleus	19.81	22.85
Bra021527.1-P	Field mustard	nucleus	22.73	22.73
Bra040529.1-P	Field mustard	nucleus	20.13	22.06
Bra001164.1-P	Field mustard	nucleus	20.13	22.06

Protein Annotations

MapMan:15.5.51.1	EnsemblPlantsGene:Bra001806	EnsemblPlants:Bra001806.1	EnsemblPlants:Bra001806.1-P	InterPro:CCAAT-binding_factor_CS	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016602	InterPro:IPR001289	UniProt:M4CC76	InterPro:NFYA
PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF14
SMART:SM00521	UniParc:UPI00025405D9	:	:	:	:

Description

AT3G20910 (E=1e-092) NF-YA9 | NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor

Coordinates

chrA03:+:18587364..18588663

Molecular Weight (calculated)

34093.4 Da

IEP (calculated)

9.157

GRAVY (calculated)

-0.991

Length

308 amino acids

Sequence
(BLAST)

001: MQSKSESGNQ IVSEAHHHTS INSLNPWLRA AAACNANSFV EEAGDKSSNG SKSPSNRDEN GNKESQVTTS PQQSGAVDLS SLGAYYKICF LLASFVTVSR
101: YAAGDYSEKS QELVHTGSTP PPHPQLVSHT VGWASSNPYQ DSYYAGMMGA YPLTYVPYGG MPHSRMQLPP EVAQEPVYVN AKQYQAIMRR RQARAKAELE
201: KKLIKSRKPY LHESRQQHAM RRPRGTGGRF AKKTNTKASQ QKDGEKTTES PTSSNSDQPE GCSDEYRTHQ SEEMQSSAYK RREEADCSGQ QWNNISSNHP
301: SQPLLAIK

Best Arabidopsis Sequence Match ( AT3G20910.1 )
(BLAST)

001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK

Arabidopsis Description

NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.