Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48025 | Canola | nucleus | 99.66 | 99.66 |
| Bra016031.1-P | Field mustard | nucleus | 81.44 | 73.6 |
| AT1G72830.2 | Thale cress | nucleus | 81.44 | 69.5 |
| Zm00001d029489_P002 | Maize | nucleus | 18.21 | 58.89 |
| Bra030996.1-P | Field mustard | mitochondrion | 33.68 | 46.45 |
| Bra014368.1-P | Field mustard | nucleus | 34.36 | 43.29 |
| Bra037968.1-P | Field mustard | nucleus | 36.08 | 41.18 |
| Os03t0174900-01 | Rice | vacuole | 27.15 | 37.8 |
| KRH47551 | Soybean | nucleus | 44.33 | 37.07 |
| Bra030899.1-P | Field mustard | nucleus | 31.96 | 37.05 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 36.77 | 36.77 |
| Bra032395.1-P | Field mustard | nucleus | 23.02 | 36.61 |
| EER92762 | Sorghum | nucleus | 30.93 | 36.29 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 35.74 | 36.11 |
| Os07t0608200-01 | Rice | nucleus | 37.46 | 35.86 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 29.55 | 35.25 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 29.21 | 35.12 |
| KRH06120 | Soybean | nucleus | 37.8 | 34.48 |
| Bra005397.1-P | Field mustard | nucleus | 23.02 | 34.01 |
| Bra021527.1-P | Field mustard | nucleus | 35.74 | 33.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.08 | 33.65 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 36.08 | 33.12 |
| PGSC0003DMT400006358 | Potato | nucleus | 31.96 | 32.86 |
| EER94699 | Sorghum | nucleus | 34.71 | 32.69 |
| Solyc03g121940.2.1 | Tomato | nucleus | 26.8 | 32.37 |
| KRH10071 | Soybean | nucleus | 32.99 | 32.32 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 32.99 | 32.0 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 32.99 | 32.0 |
| EER99688 | Sorghum | nucleus | 32.99 | 31.89 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 32.99 | 31.68 |
| Bra023913.1-P | Field mustard | nucleus | 19.59 | 31.67 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 35.05 | 30.36 |
| Zm00001d022109_P003 | Maize | nucleus | 31.27 | 30.23 |
| Zm00001d006835_P002 | Maize | nucleus | 30.93 | 30.0 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 29.9 | 30.0 |
| Os03t0411100-01 | Rice | nucleus | 32.3 | 29.65 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 25.77 | 29.41 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 33.68 | 29.25 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 25.43 | 29.13 |
| Zm00001d027874_P004 | Maize | nucleus | 26.12 | 28.9 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 25.09 | 28.74 |
| Bra006165.1-P | Field mustard | nucleus | 24.4 | 27.95 |
| Bra023378.1-P | Field mustard | nucleus | 22.68 | 27.5 |
| Os02t0776400-01 | Rice | nucleus | 25.43 | 27.41 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 27.15 | 26.96 |
| OQU85816 | Sorghum | nucleus | 26.8 | 25.66 |
| Bra008878.1-P | Field mustard | nucleus | 24.74 | 25.44 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 24.4 | 25.27 |
| Bra031242.1-P | Field mustard | nucleus | 24.74 | 24.41 |
| Bra001806.1-P | Field mustard | nucleus | 24.74 | 23.38 |
| Bra040529.1-P | Field mustard | nucleus | 21.99 | 22.78 |
| Bra009200.1-P | Field mustard | nucleus | 19.93 | 21.72 |
| Bra001164.1-P | Field mustard | nucleus | 20.62 | 21.35 |
| Zm00001d026305_P002 | Maize | nucleus | 25.09 | 16.15 |
Protein Annotations
| MapMan:15.5.51.1 | EnsemblPlantsGene:Bra008052 | EnsemblPlants:Bra008052.1 | EnsemblPlants:Bra008052.1-P | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | UniProt:M4CV07 | InterPro:NFYA |
| PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 |
| SMART:SM00521 | UniParc:UPI00025471C4 | SEG:seg | : | : | : |
Description
AT1G72830 (E=3e-121) HAP2C, ATHAP2C, NF-YA3 | NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3); transcription factor
Coordinates
chrA02:-:12864024..12865234
Molecular Weight (calculated)
32255.6 Da
IEP (calculated)
9.336
GRAVY (calculated)
-0.850
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVVDARPEH TTKQISFQDQ DSSSTQSTGQ SYTDIASSGD DDNPSRQIPF STKSGSEETQ HKGFTTHPKP GSMTGLPSIH FAPPQANFSF HYADPQFGSM
101: LAATYLPQAP ACNHQMVGMV PGRVPLPAEI TETEPVFVNA KQYHAIMRRR QQRAKLEAQN KLIKARKPYL HESRHVHALK RPRGSGGRFL NTKKLLQESE
201: QEHGKSVQQE SEKANMSRFE AHMLKHSKDR GSTNSGSDIT SLSDGADVFG HSEFQFSGFP IPTQTNQAMR VHGQSNDMHG GGDLHHFSVH I
101: LAATYLPQAP ACNHQMVGMV PGRVPLPAEI TETEPVFVNA KQYHAIMRRR QQRAKLEAQN KLIKARKPYL HESRHVHALK RPRGSGGRFL NTKKLLQESE
201: QEHGKSVQQE SEKANMSRFE AHMLKHSKDR GSTNSGSDIT SLSDGADVFG HSEFQFSGFP IPTQTNQAMR VHGQSNDMHG GGDLHHFSVH I
001: MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
Arabidopsis Description
HAP2CNuclear factor Y, subunit A3 [Source:UniProtKB/TrEMBL;Acc:F4IEZ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.