Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G366100.2 | Wheat | nucleus | 59.63 | 63.14 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 58.89 | 62.6 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 58.52 | 62.2 |
| OQU85816 | Sorghum | nucleus | 64.81 | 57.57 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 58.89 | 56.58 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 60.74 | 55.97 |
| Os03t0174900-01 | Rice | vacuole | 35.19 | 45.45 |
| KRH02649 | Soybean | nucleus | 31.11 | 39.44 |
| KRH37469 | Soybean | nucleus | 32.96 | 39.04 |
| KRH19255 | Soybean | nucleus | 32.96 | 38.2 |
| KRH12475 | Soybean | nucleus | 32.22 | 38.16 |
| PGSC0003DMT400055982 | Potato | nucleus | 28.52 | 35.65 |
| Os07t0608200-01 | Rice | nucleus | 39.26 | 34.87 |
| Os08t0196700-01 | Rice | nucleus | 24.07 | 33.68 |
| Bra014368.1-P | Field mustard | nucleus | 27.04 | 31.6 |
| CDY69800 | Canola | nucleus | 27.04 | 31.6 |
| Bra037968.1-P | Field mustard | nucleus | 29.63 | 31.37 |
| CDY26138 | Canola | nucleus | 26.67 | 30.64 |
| Os03t0411100-01 | Rice | nucleus | 35.56 | 30.28 |
| CDY02477 | Canola | nucleus | 25.56 | 30.26 |
| CDY56623 | Canola | nucleus | 25.93 | 29.91 |
| Os12t0613000-01 | Rice | nucleus | 23.7 | 29.49 |
| Bra030899.1-P | Field mustard | nucleus | 27.41 | 29.48 |
| Bra030996.1-P | Field mustard | mitochondrion | 22.96 | 29.38 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 25.56 | 28.75 |
| Solyc08g062210.2.1 | Tomato | nucleus | 34.07 | 28.31 |
| CDY51397 | Canola | nucleus | 29.63 | 28.07 |
| Os03t0696300-01 | Rice | nucleus | 26.3 | 27.31 |
| Os10t0397900-00 | Rice | nucleus | 16.67 | 27.11 |
| CDY33084 | Canola | nucleus | 30.0 | 27.09 |
| KRH10071 | Soybean | nucleus | 28.15 | 25.59 |
| CDY48025 | Canola | nucleus | 27.41 | 25.43 |
| Bra008052.1-P | Field mustard | nucleus | 27.41 | 25.43 |
| AT1G54160.1 | Thale cress | nucleus | 28.15 | 24.68 |
| Bra016031.1-P | Field mustard | nucleus | 29.26 | 24.53 |
| CDX96435 | Canola | nucleus | 29.26 | 24.53 |
| KRH47551 | Soybean | nucleus | 31.48 | 24.43 |
| CDY39091 | Canola | nucleus | 27.78 | 24.35 |
| Bra021527.1-P | Field mustard | nucleus | 27.78 | 24.35 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 36.3 | 24.32 |
| CDY33253 | Canola | nucleus | 27.04 | 23.7 |
| AT3G14020.1 | Thale cress | nucleus | 27.04 | 23.7 |
| CDX82133 | Canola | nucleus | 27.04 | 22.88 |
| CDX72950 | Canola | nucleus | 28.89 | 22.74 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 28.15 | 22.62 |
| CDY30854 | Canola | nucleus | 12.22 | 22.6 |
| CDY21741 | Canola | nucleus | 26.67 | 22.36 |
| KRH06120 | Soybean | nucleus | 26.3 | 22.26 |
| AT1G17590.3 | Thale cress | nucleus | 27.04 | 22.26 |
| AT1G72830.2 | Thale cress | nucleus | 27.78 | 21.99 |
| Os12t0618600-01 | Rice | nucleus | 24.81 | 21.54 |
| CDY70458 | Canola | nucleus | 29.26 | 19.51 |
| Os03t0647600-01 | Rice | nucleus | 25.56 | 19.49 |
| CDX81837 | Canola | nucleus | 18.15 | 16.44 |
| Os07t0158500-00 | Rice | nucleus | 22.59 | 16.09 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:9270863 | UniProt:A0A0N7KG67 | ProteinID:BAS81169.1 | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001289 | InterPro:NFYA | EnsemblPlantsGene:Os02g0776400 | EnsemblPlants:Os02t0776400-01 | PFAM:PF02045 | PRINTS:PR00616 |
| PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF10 | SMART:SM00521 | UniParc:UPI0001C7D7D1 | RefSeq:XP_015623432.1 |
| RefSeq:XP_015623433.1 | SEG:seg | : | : | : | : |
Description
HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to nuclear transcription factor Y subunit A-3. (Os02t0776400-01)
Coordinates
chr2:-:32794229..32798340
Molecular Weight (calculated)
29452.5 Da
IEP (calculated)
10.811
GRAVY (calculated)
-0.694
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPSSSSYS YASKGDSFRR TVDGPMRSTL TFDNNHSVVP SQNIDYGQPM ACISYPYNDS GSGVWASYSS RSVFHPQIVG GGTSPRVPLP SLEIADDGPI
101: YVNPKQYHGI LRRRQLRAKL EAQNKLVKTR KPYLHESRHR HAMKRARGTG GRFLNTKQLQ LQQQSHTTST KTTTDSQNSS GSVHLRLGGG AIGDQTPFPF
201: KAMDSQANIK RAAASASTFT VTSAAQKDDA FFDRHGHHLS SFSGHFGQAS AQGGVGSMHN GSQQRVPAMR
101: YVNPKQYHGI LRRRQLRAKL EAQNKLVKTR KPYLHESRHR HAMKRARGTG GRFLNTKQLQ LQQQSHTTST KTTTDSQNSS GSVHLRLGGG AIGDQTPFPF
201: KAMDSQANIK RAAASASTFT VTSAAQKDDA FFDRHGHHLS SFSGHFGQAS AQGGVGSMHN GSQQRVPAMR
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.