Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69800 | Canola | nucleus | 61.04 | 81.39 |
| CDY56623 | Canola | nucleus | 61.69 | 81.2 |
| CDY26138 | Canola | nucleus | 61.69 | 80.85 |
| Bra014368.1-P | Field mustard | nucleus | 60.39 | 80.52 |
| Bra037968.1-P | Field mustard | nucleus | 66.23 | 80.0 |
| CDY51397 | Canola | nucleus | 72.4 | 78.25 |
| CDY02477 | Canola | nucleus | 57.47 | 77.63 |
| Bra030899.1-P | Field mustard | nucleus | 62.01 | 76.1 |
| CDY33084 | Canola | nucleus | 72.4 | 74.58 |
| Zm00001d029489_P002 | Maize | nucleus | 17.53 | 60.0 |
| AT3G14020.1 | Thale cress | nucleus | 47.4 | 47.4 |
| Os03t0174900-01 | Rice | vacuole | 25.0 | 36.84 |
| EER92762 | Sorghum | nucleus | 29.55 | 36.69 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 28.9 | 36.48 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 28.57 | 36.36 |
| KRH47551 | Soybean | nucleus | 37.99 | 33.62 |
| KRH06120 | Soybean | nucleus | 34.74 | 33.54 |
| AT1G30500.2 | Thale cress | nucleus | 20.45 | 33.16 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 32.14 | 33.0 |
| Os07t0608200-01 | Rice | nucleus | 32.47 | 32.89 |
| EER99688 | Sorghum | nucleus | 31.49 | 32.23 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 29.87 | 31.94 |
| PGSC0003DMT400006358 | Potato | nucleus | 29.22 | 31.8 |
| AT1G17590.3 | Thale cress | nucleus | 33.77 | 31.71 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 30.84 | 31.67 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 30.84 | 31.35 |
| Zm00001d022109_P003 | Maize | nucleus | 30.52 | 31.23 |
| Zm00001d006835_P002 | Maize | nucleus | 30.19 | 31.0 |
| KRH10071 | Soybean | nucleus | 29.87 | 30.98 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 29.22 | 30.93 |
| AT1G72830.2 | Thale cress | nucleus | 34.09 | 30.79 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 28.9 | 30.69 |
| AT2G34720.1 | Thale cress | nucleus | 19.48 | 30.3 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 24.68 | 29.92 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 24.68 | 29.8 |
| Solyc03g121940.2.1 | Tomato | nucleus | 23.05 | 29.46 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 24.03 | 29.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.22 | 28.85 |
| EER94699 | Sorghum | nucleus | 28.9 | 28.8 |
| Os02t0776400-01 | Rice | nucleus | 24.68 | 28.15 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 30.52 | 28.06 |
| OQU85816 | Sorghum | nucleus | 27.6 | 27.96 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 25.32 | 27.76 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 26.3 | 27.65 |
| Os03t0411100-01 | Rice | nucleus | 28.25 | 27.44 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 27.92 | 27.13 |
| Zm00001d027874_P004 | Maize | nucleus | 23.05 | 27.0 |
| AT5G12840.3 | Thale cress | nucleus | 22.73 | 25.74 |
| AT3G20910.1 | Thale cress | nucleus | 24.68 | 25.08 |
| AT5G06510.2 | Thale cress | nucleus | 21.43 | 24.54 |
| AT3G05690.2 | Thale cress | mitochondrion | 22.4 | 20.78 |
| Zm00001d026305_P002 | Maize | nucleus | 22.4 | 15.27 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:841856 | ProteinID:AAD25790.1 | ProteinID:AEE33056.1 | EMBL:AF386957 | ArrayExpress:AT1G54160 |
| EnsemblPlantsGene:AT1G54160 | RefSeq:AT1G54160 | TAIR:AT1G54160 | RefSeq:AT1G54160-TAIR-G | EnsemblPlants:AT1G54160.1 | TAIR:AT1G54160.1 |
| EMBL:AY081445 | Unigene:At.57160 | InterPro:CCAAT-binding_factor_CS | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009785 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010262 | GO:GO:0016602 | GO:GO:0045892 | GO:GO:0048316 |
| InterPro:IPR001289 | InterPro:NFYA | Symbol:NFYA5 | RefSeq:NP_175818.1 | PFAM:PF02045 | PO:PO:0000036 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0003011 | PO:PO:0004507 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0025022 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF8 | UniProt:Q9SYH4 | SMART:SM00521 | UniParc:UPI00000A0102 | SEG:seg | : |
Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
Coordinates
chr1:-:20217336..20219452
Molecular Weight (calculated)
33775.6 Da
IEP (calculated)
9.361
GRAVY (calculated)
-0.628
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.