Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029489_P002 | Maize | nucleus | 25.89 | 88.89 |
| Os03t0411100-01 | Rice | nucleus | 66.02 | 64.35 |
| EER99688 | Sorghum | nucleus | 48.22 | 49.5 |
| EER92762 | Sorghum | nucleus | 38.19 | 47.58 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 42.39 | 45.02 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 41.75 | 44.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.04 | 42.63 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 42.72 | 41.64 |
| KRH02649 | Soybean | nucleus | 25.89 | 37.56 |
| KRH37469 | Soybean | nucleus | 27.51 | 37.28 |
| KRH12475 | Soybean | nucleus | 27.51 | 37.28 |
| KRH19255 | Soybean | nucleus | 27.83 | 36.91 |
| CDY69800 | Canola | nucleus | 27.51 | 36.8 |
| PGSC0003DMT400055982 | Potato | nucleus | 25.57 | 36.57 |
| Bra014368.1-P | Field mustard | nucleus | 27.18 | 36.36 |
| CDY26138 | Canola | nucleus | 27.51 | 36.17 |
| CDY48025 | Canola | nucleus | 33.01 | 35.05 |
| Bra008052.1-P | Field mustard | nucleus | 32.69 | 34.71 |
| Bra037968.1-P | Field mustard | nucleus | 28.48 | 34.51 |
| EES17387 | Sorghum | nucleus | 23.62 | 34.27 |
| OQU85816 | Sorghum | nucleus | 33.66 | 34.21 |
| CDY02477 | Canola | nucleus | 24.92 | 33.77 |
| CDY56623 | Canola | nucleus | 25.24 | 33.33 |
| CDX82133 | Canola | nucleus | 33.98 | 32.92 |
| Bra030996.1-P | Field mustard | mitochondrion | 21.68 | 31.75 |
| CDY51397 | Canola | nucleus | 29.13 | 31.58 |
| Bra030899.1-P | Field mustard | nucleus | 25.57 | 31.47 |
| CDY39091 | Canola | nucleus | 30.74 | 30.84 |
| Bra021527.1-P | Field mustard | nucleus | 30.74 | 30.84 |
| AT3G14020.1 | Thale cress | nucleus | 30.74 | 30.84 |
| AT1G17590.3 | Thale cress | nucleus | 32.69 | 30.79 |
| CDY33084 | Canola | nucleus | 29.77 | 30.77 |
| CDX96435 | Canola | nucleus | 32.04 | 30.75 |
| Bra016031.1-P | Field mustard | nucleus | 32.04 | 30.75 |
| KRH10071 | Soybean | nucleus | 29.45 | 30.64 |
| KRH47551 | Soybean | nucleus | 33.66 | 29.89 |
| CDY33253 | Canola | nucleus | 29.77 | 29.87 |
| AT1G72830.2 | Thale cress | nucleus | 32.69 | 29.62 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 32.04 | 29.46 |
| Solyc08g062210.2.1 | Tomato | nucleus | 30.74 | 29.23 |
| KRH06120 | Soybean | nucleus | 30.1 | 29.15 |
| AT1G54160.1 | Thale cress | nucleus | 28.8 | 28.9 |
| CDX72950 | Canola | nucleus | 31.72 | 28.57 |
| KXG37797 | Sorghum | nucleus | 24.6 | 28.46 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 36.89 | 28.29 |
| CDY21741 | Canola | nucleus | 29.45 | 28.26 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 21.04 | 27.08 |
| CDY70458 | Canola | nucleus | 34.3 | 26.17 |
| CDX81837 | Canola | nucleus | 22.65 | 23.49 |
| KXG37939 | Sorghum | nucleus | 24.92 | 22.32 |
| CDY30854 | Canola | nucleus | 9.71 | 20.55 |
| OQU79642 | Sorghum | plastid | 23.3 | 17.18 |
| OQU88458 | Sorghum | nucleus | 17.15 | 16.41 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:8080415 | UniProt:C5WWM8 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:EER94699 | ProteinID:EER94699 |
| ProteinID:EER94699.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 |
| ProteinID:KXG39160.1 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF28 | SMART:SM00521 | EnsemblPlantsGene:SORBI_3001G340200 | UniParc:UPI0001A83211 | RefSeq:XP_002467701.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:62771611..62776248
Molecular Weight (calculated)
33889.8 Da
IEP (calculated)
10.135
GRAVY (calculated)
-0.723
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLREMDGDP FHPMPNYDFL SGNGYSLKQL VRSNSDIDSS SSKSEQSRQD LSDSSLNGQR TPTQSDNNDI CGKRDQGMVK SLLSFGSPEA AFSPHKFDYS
101: QSFACASYTA DPYHGGVLAG YTSNGSVHPQ INGAANTRVP LPVGPAAEEP IFVNAKQYNA ILRRRQIRAK LEAQNKLVKG RKPYLHESRH RHAMKRVRGP
201: GGRFLNKKEL QEQQQQQQKA LPSLQTPTGR VSISKMAFGR DLCTESSTSH SPSTSSGISS VSNGSGMLAH QEHISFASAN FLPSMNFRVE NGGEKMAVNG
301: VRHHTPVVR
101: QSFACASYTA DPYHGGVLAG YTSNGSVHPQ INGAANTRVP LPVGPAAEEP IFVNAKQYNA ILRRRQIRAK LEAQNKLVKG RKPYLHESRH RHAMKRVRGP
201: GGRFLNKKEL QEQQQQQQKA LPSLQTPTGR VSISKMAFGR DLCTESSTSH SPSTSSGISS VSNGSGMLAH QEHISFASAN FLPSMNFRVE NGGEKMAVNG
301: VRHHTPVVR
001: MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
Arabidopsis Description
HAP2CNuclear factor Y, subunit A3 [Source:UniProtKB/TrEMBL;Acc:F4IEZ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.