Factsheet for VIT_08s0032g01190.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68018	Soybean	nucleus	58.54	58.54
KRH72156	Soybean	nucleus	57.32	56.12
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	57.01	54.05
KRH32866	Soybean	nucleus	53.66	53.82
CDY05192	Canola	nucleus	28.35	51.96
AT5G06510.2	Thale cress	nucleus	42.38	51.67
PGSC0003DMT400055061	Potato	nucleus	47.87	50.48
Solyc01g006930.2.1	Tomato	nucleus	47.26	49.84
GSMUA_Achr7P07860_001	Banana	nucleus	30.18	49.25
PGSC0003DMT400072322	Potato	nucleus	29.27	48.98
CDX98930	Canola	nucleus	38.41	47.19
Bra001164.1-P	Field mustard	nucleus	40.24	46.98
Solyc10g081840.1.1	Tomato	nucleus	21.95	46.75
CDY18809	Canola	nucleus	39.02	46.72
CDY14662	Canola	nucleus	39.94	46.62
CDX74133	Canola	nucleus	39.94	46.62
Bra040529.1-P	Field mustard	nucleus	39.33	45.91
Bra009200.1-P	Field mustard	nucleus	36.89	45.32
CDX70098	Canola	nucleus	36.89	45.32
AT3G05690.2	Thale cress	mitochondrion	41.77	41.27
Os12t0618600-01	Rice	nucleus	36.89	38.91
GSMUA_Achr4P31420_001	Banana	mitochondrion, nucleus	39.33	38.28
TraesCS5B01G028500.1	Wheat	nucleus	39.33	38.05
GSMUA_Achr4P28390_001	Banana	nucleus	37.2	37.89
TraesCS5B01G375500.1	Wheat	nucleus	37.2	37.77
TraesCS5A01G373500.1	Wheat	nucleus	37.5	37.73
TraesCS5D01G383000.1	Wheat	nucleus	37.2	37.54
TraesCS5D01G037800.1	Wheat	nucleus	39.02	37.43
TraesCS5A01G029900.1	Wheat	nucleus	38.72	37.24
HORVU5Hr1G007890.1	Barley	nucleus	38.11	36.66
Zm00001d033215_P001	Maize	nucleus	35.98	36.65
GSMUA_Achr5P02590_001	Banana	nucleus	35.06	35.49
KXG37939	Sorghum	nucleus	37.2	35.36
Zm00001d013676_P002	Maize	nucleus	36.59	35.19
Zm00001d031092_P001	Maize	nucleus	35.06	34.85
Os03t0647600-01	Rice	nucleus	36.89	34.18
VIT_10s0003g04650.t01	Wine grape	nucleus	20.12	31.73
HORVU5Hr1G092700.5	Barley	nucleus	37.5	31.54
Os07t0158500-00	Rice	nucleus	33.23	28.76
OQU79642	Sorghum	plastid	35.98	28.16
VIT_08s0007g08250.t01	Wine grape	nucleus	27.74	25.71
VIT_06s0004g02270.t01	Wine grape	nucleus	22.56	24.18
Zm00001d007882_P001	Maize	nucleus	21.04	23.47
OQU88458	Sorghum	nucleus	22.87	23.22
VIT_09s0002g01590.t01	Wine grape	nucleus	23.17	22.62
VIT_11s0016g01480.t01	Wine grape	endoplasmic reticulum, golgi	26.52	21.59
VIT_13s0064g00860.t01	Wine grape	nucleus	25.61	20.74

Protein Annotations

EntrezGene:100255650	wikigene:100255650	MapMan:15.5.51.1	InterPro:CCAAT-binding_factor_CS	ProteinID:CCB61571	ProteinID:CCB61571.1
UniProt:F6I3K7	EMBL:FN596742	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016602
InterPro:IPR001289	EntrezGene:LOC100255650	wikigene:LOC100255650	InterPro:NFYA	PFAM:PF02045	PRINTS:PR00616
ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF7	SMART:SM00521	UniParc:UPI00015CD295
ArrayExpress:VIT_08s0032g01190	EnsemblPlantsGene:VIT_08s0032g01190	EnsemblPlants:VIT_08s0032g01190.t01	RefSeq:XP_002263793	RefSeq:XP_002263793.1	:

Description

No Description!

Coordinates

chr8:-:5783406..5792115

Molecular Weight (calculated)

36288.1 Da

IEP (calculated)

9.401

GRAVY (calculated)

-0.662

Length

328 amino acids

Sequence
(BLAST)

001: MQTTYFKEHA GSAHNPTGQL SSAAAVPWWS GLGSQSVYDE SFAQLKSLSM EHPGKGDQLT AIKQVELGAE DGTDKGNSTQ FTIFSGECKN SEDAQKPQPL
101: QATISMQSTI PEYQTRFELG FGQPMVCVKY PYADQCYGVF SAYGHQVMGR IMLPLSLTTD DGPIYVNAKQ YHGIIRRRQS RAKAELENKL TRARKPYMHE
201: SRHLHAMRRP RGCGGRFLKK NLNGGKCGTD MKKVDNRQLS QPTGSQISEV LQSDGGNMNS PKEANGNLSK LLGSEVTSMY SRRYLHQFPV NNVQASVDTL
301: VDMMDRGHGI VMPSKWVAAA DNRCNPKA

Best Arabidopsis Sequence Match ( AT5G06510.1 )
(BLAST)

001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI

Arabidopsis Description

NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.