Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G037800.1 | Wheat | nucleus | 98.53 | 98.25 |
TraesCS5B01G028500.1 | Wheat | nucleus | 97.07 | 97.64 |
HORVU5Hr1G007890.1 | Barley | nucleus | 93.55 | 93.55 |
Os12t0618600-01 | Rice | nucleus | 66.57 | 72.99 |
Zm00001d031092_P001 | Maize | nucleus | 61.58 | 63.64 |
TraesCS5A01G373500.1 | Wheat | nucleus | 60.7 | 63.5 |
OQU79642 | Sorghum | plastid | 63.93 | 52.03 |
Solyc10g081840.1.1 | Tomato | nucleus | 19.94 | 44.16 |
CDY05192 | Canola | nucleus | 20.82 | 39.66 |
PGSC0003DMT400072322 | Potato | nucleus | 22.58 | 39.29 |
KRH72156 | Soybean | nucleus | 38.42 | 39.1 |
KRH68018 | Soybean | nucleus | 37.24 | 38.72 |
VIT_08s0032g01190.t01 | Wine grape | nucleus | 37.24 | 38.72 |
KRH32866 | Soybean | nucleus | 36.07 | 37.61 |
AT5G06510.2 | Thale cress | nucleus | 29.03 | 36.8 |
PGSC0003DMT400055061 | Potato | nucleus | 33.14 | 36.33 |
KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 36.66 | 36.13 |
Solyc01g006930.2.1 | Tomato | nucleus | 32.55 | 35.69 |
CDY18809 | Canola | nucleus | 27.57 | 34.31 |
Bra001164.1-P | Field mustard | nucleus | 28.15 | 34.16 |
CDX70098 | Canola | nucleus | 26.69 | 34.08 |
Bra009200.1-P | Field mustard | nucleus | 26.69 | 34.08 |
CDY14662 | Canola | nucleus | 27.57 | 33.45 |
CDX74133 | Canola | nucleus | 27.57 | 33.45 |
Bra040529.1-P | Field mustard | nucleus | 27.57 | 33.45 |
CDX98930 | Canola | nucleus | 25.51 | 32.58 |
AT3G05690.2 | Thale cress | mitochondrion | 30.79 | 31.63 |
TraesCS5A01G043300.2 | Wheat | nucleus | 17.89 | 29.05 |
TraesCS4A01G277300.1 | Wheat | nucleus | 22.29 | 28.57 |
TraesCS6A01G335400.1 | Wheat | nucleus | 19.94 | 26.77 |
TraesCS2A01G172500.1 | Wheat | nucleus | 21.41 | 24.09 |
Protein Annotations
MapMan:15.5.51.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 |
InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
PANTHER:PTHR12632 | PANTHER:PTHR12632:SF17 | SMART:SM00521 | EnsemblPlantsGene:TraesCS5A01G029900 | EnsemblPlants:TraesCS5A01G029900.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:25887879..25891445
Molecular Weight (calculated)
37009.8 Da
IEP (calculated)
9.002
GRAVY (calculated)
-0.543
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRFKNHHEG FAGQQLLAAA AAAGQASGGA PLPWWVGSQL LYGEPMGHGK APPAVPMSMS PPEDACRDGQ FQVVPRAQAL LDAVPLPPQP MGERGIPEAL
101: KFSMAHGKGG NSSEHSAPIT LQSPFTEYND HFELGLGQSV ISSNYYSDQQ YGLLSSYGMR SASSGRMLIP LNMPADAPIY VNAKQYEGIL RRRRARAKAE
201: KENRLVKARK PYLHESRHLH AMRRARGSGG RFLNTKKETN GKDTGVGSKA MVGNPLMRSA ASLSSEIQHS EQGNPSSVSS MSGSEVTSLY DHEDVDHYHN
301: FEHLRTHFFT PLPSIMDGEH GAGNPFKWAA ASDGCCNLLK A
101: KFSMAHGKGG NSSEHSAPIT LQSPFTEYND HFELGLGQSV ISSNYYSDQQ YGLLSSYGMR SASSGRMLIP LNMPADAPIY VNAKQYEGIL RRRRARAKAE
201: KENRLVKARK PYLHESRHLH AMRRARGSGG RFLNTKKETN GKDTGVGSKA MVGNPLMRSA ASLSSEIQHS EQGNPSSVSS MSGSEVTSLY DHEDVDHYHN
301: FEHLRTHFFT PLPSIMDGEH GAGNPFKWAA ASDGCCNLLK A
001: MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
Arabidopsis Description
UNE8Nuclear factor Y, subunit A2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSX7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.