Factsheet for TraesCS5A01G373500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G383000.1	Wheat	nucleus	94.17	94.46
TraesCS5B01G375500.1	Wheat	nucleus	92.94	93.81
HORVU5Hr1G092700.5	Barley	nucleus	92.33	77.18
Zm00001d033215_P001	Maize	nucleus	64.11	64.91
KXG37939	Sorghum	nucleus	65.34	61.74
Os03t0647600-01	Rice	nucleus	66.87	61.58
TraesCS5A01G029900.1	Wheat	nucleus	63.5	60.7
Zm00001d013676_P002	Maize	nucleus	61.96	59.24
Solyc10g081840.1.1	Tomato	nucleus	20.86	44.16
PGSC0003DMT400072322	Potato	nucleus	23.31	38.78
CDY05192	Canola	nucleus	21.17	38.55
VIT_08s0032g01190.t01	Wine grape	nucleus	37.73	37.5
AT5G06510.2	Thale cress	nucleus	30.37	36.8
KRH68018	Soybean	nucleus	36.5	36.28
KRH72156	Soybean	nucleus	36.5	35.52
PGSC0003DMT400055061	Potato	nucleus	33.44	35.05
Solyc01g006930.2.1	Tomato	nucleus	32.52	34.08
KRH32866	Soybean	nucleus	34.05	33.95
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	35.58	33.53
CDY18809	Canola	nucleus	27.91	33.21
Bra001164.1-P	Field mustard	nucleus	28.53	33.1
CDY14662	Canola	nucleus	28.53	33.1
CDX74133	Canola	nucleus	28.53	33.1
CDX70098	Canola	nucleus	26.99	32.96
Bra009200.1-P	Field mustard	nucleus	26.99	32.96
Bra040529.1-P	Field mustard	nucleus	27.91	32.38
CDX98930	Canola	nucleus	26.38	32.21
TraesCS5A01G043300.2	Wheat	nucleus	18.71	29.05
AT3G05690.2	Thale cress	mitochondrion	28.83	28.31
TraesCS4A01G277300.1	Wheat	nucleus	22.7	27.82
TraesCS6A01G335400.1	Wheat	nucleus	19.33	24.8
TraesCS2A01G172500.1	Wheat	nucleus	22.7	24.42

Protein Annotations

EnsemblPlants:TraesCS5A01G373500.1	EnsemblPlantsGene:TraesCS5A01G373500	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001289	InterPro:NFYA
PANTHER:PTHR12632	PANTHER:PTHR12632:SF17	PFAM:PF02045	PFscan:PS51152	PRINTS:PR00616	SEG:seg
SMART:SM00521	MapMan:15.5.51.1	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:571465039..571467853

Molecular Weight (calculated)

35063.4 Da

IEP (calculated)

9.451

GRAVY (calculated)

-0.584

Length

326 amino acids

Sequence
(BLAST)

001: MMSFKGHDGF GQASNGGGGG ASVPWWTVSQ MLYGEPGAAL SSSPEAEPRR DAQFQVVPRA QGILDPLPAP KSGAPEVLKF SVFQGNLESG GNKGEKPMEH
101: SATIALQSPL PEYNSRFEFG PGPSMMSSGY PSAEQCYGLL TTYAMKSTPG GRLLLPLNAT ADAPIYVNAK QYEGILRRRR ARAKVERENQ LVKGRKPYLH
201: ESRHRHAMRR ARGTGGRFLN TKKEGNGKDA GGGGKRAECA PPTRFATSPS SVIPSNPHSR SSISSLSGSE VSSMYDHDDV DHYNSIEHLR TPFFTPLPII
301: MDGEHGASAP FKWATAADGC CELLKA

Best Arabidopsis Sequence Match ( AT5G06510.1 )
(BLAST)

001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI

Arabidopsis Description

NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.