Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37939 | Sorghum | nucleus | 84.75 | 83.77 |
| Zm00001d033215_P001 | Maize | nucleus | 78.59 | 83.23 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 59.53 | 62.46 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 59.24 | 61.96 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 58.36 | 61.61 |
| Os03t0647600-01 | Rice | nucleus | 58.06 | 55.93 |
| Zm00001d031092_P001 | Maize | nucleus | 50.44 | 52.12 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 58.94 | 51.54 |
| Zm00001d029489_P002 | Maize | nucleus | 13.2 | 50.0 |
| Solyc10g081840.1.1 | Tomato | nucleus | 18.18 | 40.26 |
| PGSC0003DMT400072322 | Potato | nucleus | 21.11 | 36.73 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 35.19 | 36.59 |
| CDY05192 | Canola | nucleus | 19.06 | 36.31 |
| AT5G06510.2 | Thale cress | nucleus | 26.98 | 34.2 |
| Solyc01g006930.2.1 | Tomato | nucleus | 30.79 | 33.76 |
| PGSC0003DMT400055061 | Potato | nucleus | 30.21 | 33.12 |
| KRH68018 | Soybean | nucleus | 31.67 | 32.93 |
| KRH72156 | Soybean | nucleus | 32.26 | 32.84 |
| Bra009200.1-P | Field mustard | nucleus | 25.22 | 32.21 |
| CDX70098 | Canola | nucleus | 25.22 | 32.21 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 31.96 | 31.5 |
| CDY18809 | Canola | nucleus | 25.22 | 31.39 |
| Zm00001d007882_P001 | Maize | nucleus | 26.98 | 31.29 |
| KRH32866 | Soybean | nucleus | 29.91 | 31.19 |
| CDX98930 | Canola | nucleus | 24.34 | 31.09 |
| CDY14662 | Canola | nucleus | 25.51 | 30.96 |
| CDX74133 | Canola | nucleus | 25.51 | 30.96 |
| Bra001164.1-P | Field mustard | nucleus | 25.51 | 30.96 |
| Bra040529.1-P | Field mustard | nucleus | 25.22 | 30.61 |
| Zm00001d033602_P002 | Maize | nucleus | 21.41 | 27.65 |
| AT3G05690.2 | Thale cress | mitochondrion | 24.63 | 25.3 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 20.53 | 23.89 |
| Zm00001d022109_P003 | Maize | nucleus | 20.82 | 23.59 |
| Zm00001d006835_P002 | Maize | nucleus | 19.65 | 22.33 |
| Zm00001d041491_P001 | Maize | nucleus | 17.3 | 20.42 |
| Zm00001d027874_P004 | Maize | nucleus | 14.66 | 19.01 |
| Zm00001d026305_P002 | Maize | nucleus | 13.2 | 9.96 |
Protein Annotations
| EntrezGene:100193094 | MapMan:15.5.51.1 | ProteinID:AQK64142.1 | ProteinID:AQK64143.1 | ProteinID:AQK64145.1 | EMBL:BT069933 |
| UniProt:C0PNR4 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | EMBL:KJ728292 | InterPro:NFYA |
| PFAM:PF02045 | PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF17 | SMART:SM00521 |
| UniParc:UPI000152A25B | EnsemblPlantsGene:Zm00001d013676 | EnsemblPlants:Zm00001d013676_P002 | EnsemblPlants:Zm00001d013676_T002 | SEG:seg | : |
Description
CCAAT-HAP2-transcription factor 210Nuclear transcription factor Y subunit A-10
Coordinates
chr5:+:17050293..17054266
Molecular Weight (calculated)
35738.5 Da
IEP (calculated)
9.674
GRAVY (calculated)
-0.381
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSFKGHEGF GQVSGAGMSQ ASHGAAPAGA PLPWWAGAQL LSGEPAPLSP EEAPRDTQFQ VVPGASQGTP DPAPPKGGTP KVLKFSVFQG NLESGGKGEK
101: TPKNSTAVVL QSPFAEYNGR FEIGLGQSML VPSSYSCADQ CYGMLTTYGM RSMSGGRMLL PLIAPADAPV YVNPKQYEGI LRRRRARAKA ESENRLTKGR
201: KPYLHESRHL HAMRRVRGSG GRFLNTNKGG HGTDVAANGG SKMAAAAAPS RLAMPPSAEP PWLSGLSDGS NPCCHSRSSV SSLSGSYVAS IYGGLEQHLR
301: APPFFTPLPP VMDGDHGGPT AATISSFKWA ASDGCCELLR A
101: TPKNSTAVVL QSPFAEYNGR FEIGLGQSML VPSSYSCADQ CYGMLTTYGM RSMSGGRMLL PLIAPADAPV YVNPKQYEGI LRRRRARAKA ESENRLTKGR
201: KPYLHESRHL HAMRRVRGSG GRFLNTNKGG HGTDVAANGG SKMAAAAAPS RLAMPPSAEP PWLSGLSDGS NPCCHSRSSV SSLSGSYVAS IYGGLEQHLR
301: APPFFTPLPP VMDGDHGGPT AATISSFKWA ASDGCCELLR A
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.