Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37939 | Sorghum | nucleus | 89.13 | 83.19 |
| Zm00001d013676_P002 | Maize | nucleus | 83.23 | 78.59 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 65.53 | 64.92 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 64.91 | 64.11 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 64.29 | 64.09 |
| Os03t0647600-01 | Rice | nucleus | 63.35 | 57.63 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 65.22 | 53.85 |
| Zm00001d031092_P001 | Maize | nucleus | 53.11 | 51.82 |
| Zm00001d029489_P002 | Maize | nucleus | 14.29 | 51.11 |
| Solyc10g081840.1.1 | Tomato | nucleus | 19.57 | 40.91 |
| CDY05192 | Canola | nucleus | 20.5 | 36.87 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 36.65 | 35.98 |
| PGSC0003DMT400072322 | Potato | nucleus | 21.43 | 35.2 |
| KRH72156 | Soybean | nucleus | 35.71 | 34.33 |
| KRH68018 | Soybean | nucleus | 34.16 | 33.54 |
| Solyc01g006930.2.1 | Tomato | nucleus | 32.3 | 33.44 |
| PGSC0003DMT400055061 | Potato | nucleus | 32.3 | 33.44 |
| AT5G06510.2 | Thale cress | nucleus | 27.64 | 33.09 |
| KRH32866 | Soybean | nucleus | 33.23 | 32.72 |
| Bra009200.1-P | Field mustard | nucleus | 26.4 | 31.84 |
| CDX70098 | Canola | nucleus | 26.4 | 31.84 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 33.85 | 31.5 |
| CDY18809 | Canola | nucleus | 26.71 | 31.39 |
| Zm00001d007882_P001 | Maize | nucleus | 28.57 | 31.29 |
| CDX74133 | Canola | nucleus | 27.02 | 30.96 |
| CDY14662 | Canola | nucleus | 27.02 | 30.96 |
| Bra001164.1-P | Field mustard | nucleus | 27.02 | 30.96 |
| Bra040529.1-P | Field mustard | nucleus | 26.71 | 30.61 |
| CDX98930 | Canola | nucleus | 25.16 | 30.34 |
| Zm00001d033602_P002 | Maize | nucleus | 23.6 | 28.79 |
| AT3G05690.2 | Thale cress | mitochondrion | 26.71 | 25.9 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 22.05 | 24.23 |
| Zm00001d022109_P003 | Maize | nucleus | 21.12 | 22.59 |
| Zm00001d041491_P001 | Maize | nucleus | 19.57 | 21.8 |
| Zm00001d006835_P002 | Maize | nucleus | 19.57 | 21.0 |
| Zm00001d027874_P004 | Maize | nucleus | 16.77 | 20.53 |
| Zm00001d026305_P002 | Maize | nucleus | 13.98 | 9.96 |
Protein Annotations
| EntrezGene:100283565 | MapMan:15.5.51.1 | UniProt:B4FIN9 | EMBL:BT036977 | EMBL:BT041906 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001289 | EMBL:KJ728287 | InterPro:NFYA | ProteinID:ONM06984.1 | ProteinID:ONM06986.1 |
| PFAM:PF02045 | PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF17 | SMART:SM00521 |
| UniParc:UPI000152A17D | EnsemblPlantsGene:Zm00001d033215 | EnsemblPlants:Zm00001d033215_P001 | EnsemblPlants:Zm00001d033215_T001 | SEG:seg | : |
Description
CCAAT-HAP2-transcription factor 26 CCAAT-HAP2-transcription factor 26
Coordinates
chr1:+:254416539..254420845
Molecular Weight (calculated)
34124.5 Da
IEP (calculated)
10.054
GRAVY (calculated)
-0.508
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSFKGHEGF GQVAAAGAGS QAASHGGAGP LPWWAGPQLL FGEPAPPSPE ETRRDAQFQV VPGVQGTPDP APPKTGTPEV LKFSVFQGNL ESGGKGEKTP
101: KNSTTIALQS PFPEYNGRFE IGLGQSMLAP SNYPCADQCY GMLAAYGMRS MSGGRMLLPL NATADAPIYV NPKQYEGILR RRRARAKAES ENRLAKGRKP
201: YLHESRHLHA MRRVRGTGGR FVNTKKEGRG TGVASNGGSK TAAAAPSRLA MPPSFQSSVA SLSGSDVSNM YSGGLEQHLR APHFFTPLPP IMEDGDHGGP
301: PTRISSSFKW AASDGCCELL KA
101: KNSTTIALQS PFPEYNGRFE IGLGQSMLAP SNYPCADQCY GMLAAYGMRS MSGGRMLLPL NATADAPIYV NPKQYEGILR RRRARAKAES ENRLAKGRKP
201: YLHESRHLHA MRRVRGTGGR FVNTKKEGRG TGVASNGGSK TAAAAPSRLA MPPSFQSSVA SLSGSDVSNM YSGGLEQHLR APHFFTPLPP IMEDGDHGGP
301: PTRISSSFKW AASDGCCELL KA
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.