Factsheet for GSMUA_Achr5P02590_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P31420_001	Banana	mitochondrion, nucleus	67.59	64.99
GSMUA_Achr4P28390_001	Banana	nucleus	58.02	58.39
GSMUA_Achr7P07860_001	Banana	nucleus	35.49	57.21
Solyc10g081840.1.1	Tomato	nucleus	17.59	37.01
AT5G06510.2	Thale cress	nucleus	30.56	36.8
CDY05192	Canola	nucleus	20.06	36.31
PGSC0003DMT400072322	Potato	nucleus	21.6	35.71
KRH68018	Soybean	nucleus	35.49	35.06
VIT_08s0032g01190.t01	Wine grape	nucleus	35.49	35.06
KRH72156	Soybean	nucleus	35.8	34.63
KRH32866	Soybean	nucleus	33.64	33.33
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	35.49	33.24
CDX98930	Canola	nucleus	27.16	32.96
Bra009200.1-P	Field mustard	nucleus	26.85	32.58
CDX70098	Canola	nucleus	26.85	32.58
CDY14662	Canola	nucleus	27.47	31.67
CDX74133	Canola	nucleus	27.47	31.67
Solyc01g006930.2.1	Tomato	nucleus	30.25	31.51
Os07t0158500-00	Rice	nucleus	36.73	31.4
Bra001164.1-P	Field mustard	nucleus	27.16	31.32
PGSC0003DMT400055061	Potato	nucleus	29.63	30.87
CDY18809	Canola	nucleus	25.93	30.66
Bra040529.1-P	Field mustard	nucleus	25.93	29.89
Zm00001d007882_P001	Maize	nucleus	26.23	28.91
AT3G05690.2	Thale cress	mitochondrion	28.4	27.71
GSMUA_Achr9P10300_001	Banana	nucleus	19.75	27.35
GSMUA_Achr7P01070_001	Banana	nucleus	19.44	26.92
GSMUA_Achr4P31650_001	Banana	nucleus	18.52	26.32
OQU88458	Sorghum	nucleus	25.93	26.01
GSMUA_Achr2P21730_001	Banana	nucleus	21.91	24.4
GSMUA_Achr8P30700_001	Banana	nucleus	23.46	23.97
GSMUA_Achr4P03600_001	Banana	nucleus	21.6	23.49
GSMUA_Achr8P16700_001	Banana	nucleus	20.06	22.57
GSMUA_AchrUn_...	Banana	nucleus	21.3	22.12
GSMUA_Achr3P29730_001	Banana	nucleus	20.99	21.25
GSMUA_Achr4P11090_001	Banana	vacuole	22.84	20.22

Protein Annotations

MapMan:15.5.51.1	InterPro:CCAAT-binding_factor_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016602
EnsemblPlantsGene:GSMUA_Achr5G02590_001	EnsemblPlants:GSMUA_Achr5P02590_001	EnsemblPlants:GSMUA_Achr5T02590_001	InterPro:IPR001289	UniProt:M0SV38	InterPro:NFYA
PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF17
SMART:SM00521	UniParc:UPI0002966735	SEG:seg	:	:	:

Description

nuclear transcription factor Y subunit, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G02590_001]

Coordinates

chr5:-:1667598..1671357

Molecular Weight (calculated)

35417.1 Da

IEP (calculated)

9.061

GRAVY (calculated)

-0.531

Length

324 amino acids

Sequence
(BLAST)

001: MVISETPQAT LVPWLVGSQL IYGDPLSQLK PLSRDHTDGD DQITSVSRQM NHVIDPRRRP SSGSEIPEKG TNGTVKFSIV PDPKDLGEVQ KTQQHYVPFP
101: LQSSLRENPG CFEPGLGQSM VCPSHSYVDQ FYGLYATYAA QAMHGRMLLP MAVATQGPIY VNAKQFNAIL RRRKARAKAE KKNKSIKVRK PYLHESRHIH
201: AMHRVRGCSG RFLNTKKEGN VGNGGCKVKE WMPPQPANFE ASSETLHSGN LKMNSTSSRS SASGSEVTSV CAREDIGDFH IVDNPSPSGF CSHLSMMSGG
301: EGASIGHRWG AAADGCCDPD LLKI

Best Arabidopsis Sequence Match ( AT5G06510.1 )
(BLAST)

001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI

Arabidopsis Description

NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.