Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021053 | Potato | nucleus | 94.06 | 85.83 |
| Solyc10g081840.1.1 | Tomato | nucleus | 21.92 | 31.17 |
| Os03t0696300-01 | Rice | nucleus | 33.33 | 28.08 |
| Solyc02g069860.2.1 | Tomato | nucleus | 26.03 | 27.4 |
| KXG37797 | Sorghum | nucleus | 33.33 | 27.34 |
| Zm00001d033602_P002 | Maize | nucleus | 32.88 | 27.27 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 31.51 | 25.94 |
| Solyc03g121940.2.1 | Tomato | nucleus | 28.31 | 25.73 |
| Solyc12g009050.1.1 | Tomato | nucleus | 29.68 | 25.69 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 31.05 | 25.56 |
| Solyc01g087240.2.1 | Tomato | nucleus | 34.25 | 24.75 |
| Solyc01g008490.2.1 | Tomato | nucleus | 33.33 | 23.4 |
| Solyc11g065700.1.1 | Tomato | nucleus | 31.51 | 23.0 |
| Solyc08g062210.2.1 | Tomato | nucleus | 32.88 | 22.15 |
| Solyc01g006930.2.1 | Tomato | nucleus | 26.48 | 18.65 |
Protein Annotations
| EnsemblPlants:Solyc10g079150.1.1 | EnsemblPlantsGene:Solyc10g079150.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | InterPro:NFYA |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF6 | PFAM:PF02045 | PFscan:PS51152 | PRINTS:PR00616 | SEG:seg |
| SMART:SM00521 | UniParc:UPI000276A589 | UniProt:K4D2F6 | MapMan:15.5.51.1 | : | : |
Description
No Description!
Coordinates
chr10:-:60755858..60757741
Molecular Weight (calculated)
24859.2 Da
IEP (calculated)
9.879
GRAVY (calculated)
-0.882
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENLRAANQ FELMTPSSIA FKSYPFSEVP QYSGGNVTIA CGEPMVNQNM ERSSIVHHNG RMILPVEVKE EPMYVNAKQY HGILRRRQLR AKAVLQQKVV
101: KSRKPYLHES RHRHAMRRAR DGGGRFLNTK KKIQSTTTTT NNNTTPSSRG KSSLDSNSSP NYLLNYEGDI GSSNNTNSVE GFQFQSGIHN TTENLQLGCH
201: YQWNLNDNNH CNCMHSEHF
101: KSRKPYLHES RHRHAMRRAR DGGGRFLNTK KKIQSTTTTT NNNTTPSSRG KSSLDSNSSP NYLLNYEGDI GSSNNTNSVE GFQFQSGIHN TTENLQLGCH
201: YQWNLNDNNH CNCMHSEHF
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGLM GVQQQGVPLP SDAVEEPVFV
101: NAKQYHGILR RRQSRARLES QNKVIKSRKP YLHESRHLHA IRRPRGCGGR FLNAKKEDEH HEDSSHEEKS NLSAGKSAMA ASSGTS
101: NAKQYHGILR RRQSRARLES QNKVIKSRKP YLHESRHLHA IRRPRGCGGR FLNAKKEDEH HEDSSHEEKS NLSAGKSAMA ASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.