Factsheet for PGSC0003DMT400013687

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400022864
PGSC0003DMT400023896
PGSC0003DMT400036790
PGSC0003DMT400054512
PGSC0003DMT400069203
PGSC0003DMT400072364
PGSC0003DMT400074101
PGSC0003DMT400078676

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G60340.1	PGSC0003DMT400023896	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400069203	AT1G22920.1	21798944
AT5G60340.1	PGSC0003DMT400078676	AT2G22680.1	21798944
AT5G60340.1	PGSC0003DMT400022864	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400054512	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400072364	AT2G36160.1	23121860
AT5G60340.1	PGSC0003DMT400036790	AT3G17860.1	21798944
AT5G60340.1	PGSC0003DMT400074101	AT3G17860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021286	Potato	mitochondrion	27.42	48.57
PGSC0003DMT400089563	Potato	cytosol	25.81	34.04
PGSC0003DMT400085557	Potato	cytosol, mitochondrion	28.23	33.33
Solyc06g075310.2.1	Tomato	cytosol	28.23	26.32
PGSC0003DMT400019370	Potato	mitochondrion	32.26	21.86
VIT_06s0004g03280.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	25.0	17.71
PGSC0003DMT400070488	Potato	mitochondrion	24.19	16.95
GSMUA_Achr8P34050_001	Banana	mitochondrion	21.77	15.25
KRH08572	Soybean	nucleus	21.77	15.08
KRH70217	Soybean	nucleus	21.77	15.08
Os07t0412400-01	Rice	mitochondrion	20.16	13.89
Bra006665.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	19.35	13.56
CDX71036	Canola	cytosol	19.35	13.56
Bra002487.1-P	Field mustard	cytosol	19.35	13.48
CDX88754	Canola	cytosol, mitochondrion, nucleus, plastid	18.55	12.99
TraesCS6A01G074100.1	Wheat	mitochondrion	18.55	12.92
TraesCSU01G086500.1	Wheat	mitochondrion, plastid	18.55	12.92
TraesCSU01G123400.1	Wheat	mitochondrion	18.55	12.92
Zm00001d019481_P001	Maize	mitochondrion	18.55	12.85
AT5G60340.1	Thale cress	mitochondrion	16.94	11.8
OQU88892	Sorghum	plastid	20.16	10.59
KRH34487	Soybean	cytosol	10.48	10.16
HORVU6Hr1G013200.1	Barley	mitochondrion	18.55	7.72
KRG92307	Soybean	cytosol	7.26	7.14
CDX80174	Canola	plastid	21.77	6.51
CDY31552	Canola	plastid	20.97	6.3

Protein Annotations

EnsemblPlants:PGSC0003DMT400013687	EnsemblPlantsGene:PGSC0003DMG400005351	GO:GO:0005575	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	InterPro:Mlo	PANTHER:PTHR31942	PANTHER:PTHR31942:SF34	PFAM:PF03094
PGSC:PGSC0003DMG400005351	SEG:seg	UniParc:UPI000294A894	UniProt:M1A376	MapMan:35.2	:

Description

MLO1 [Source:PGSC_GENE;Acc:PGSC0003DMG400005351]

Coordinates

chr4:-:30814211..30816287

Molecular Weight (calculated)

14363.3 Da

IEP (calculated)

5.778

GRAVY (calculated)

-0.360

Length

124 amino acids

Sequence
(BLAST)

001: MASLEVVTEL RHINVGNFAN EENLTNGWDD TFDCYYINED QWLLEKRKKP LYEALEKIKA ELMLLGFLSL LLTVLQEPVS NLCVPKSIGY SWHPCKPKAD
101: AQSEYEVTSC DKKMRKWRAC KVCS

Best Arabidopsis Sequence Match ( AT2G39200.1 )
(BLAST)

001: MAIKERSLEE TPTWAVAVVC FVLLFISIMI EYFLHFIGHW FKKKHKKALS EALEKVKAEL MLLGFISLLL VVLQTPVSEI CIPRNIAATW HPCSNHQEIA
101: KYGKDYIDDG RKILEDFDSN DFYSPRRNLA TKGYDKCAEK GKVALVSAYG IHQLHIFIFV LAVFHVLYCI ITYALGKTKM KKWKSWERET KTIEYQYAND
201: PERFRFARDT SFGRRHLNIW SKSTFTLWIT CFFRQFFGSV TKVDYLTLRH GFIMAHLPAG SAARFDFQKY IERSLEQDFT VVVGISPLIW CIAVLFILTN
301: THGWDSYLWL PFLPLIVILI VGAKLQMIIS KLGLRIQEKG DVVKGAPVVE PGDDLFWFGR PRFILFLIHL VLFTNAFQLA FFVWSTYEFT LKNCFHHKTE
401: DIAIRITMGV LIQVLCSYIT LPLYALVTQM GTSMRPTIFN DRVANALKKW HHTAKKQTKH GHSGSNTPHS SRPTTPTHGM SPVHLLHNYN NRSLDQQTSF
501: TASPSPPRFS DYSGQGHGHQ HFFDPESQNH SYQREITDSE FSNSHHPQVD MASPVREEKE IVEHVKVDLS EFTFKK

Arabidopsis Description

MLO12MLO-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178VNS1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.