Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g072010.1.1 | Tomato | mitochondrion | 74.47 | 74.67 |
| VIT_06s0009g01460.t01 | Wine grape | mitochondrion, plastid | 68.35 | 73.43 |
| Bra002352.1-P | Field mustard | mitochondrion | 71.81 | 71.43 |
| CDY16591 | Canola | mitochondrion | 71.28 | 70.9 |
| CDX92414 | Canola | mitochondrion | 71.81 | 69.41 |
| AT5G21060.2 | Thale cress | mitochondrion, plastid | 69.15 | 68.78 |
| PGSC0003DMT400070475 | Potato | mitochondrion | 74.2 | 66.59 |
| TraesCS5B01G141000.2 | Wheat | plastid | 65.69 | 65.17 |
| TraesCS5D01G149900.1 | Wheat | mitochondrion, vacuole | 65.69 | 64.16 |
| TraesCS5A01G142200.1 | Wheat | plastid | 65.69 | 64.16 |
| Os11t0128800-01 | Rice | plasma membrane | 65.16 | 63.8 |
| Os12t0125400-01 | Rice | plasma membrane | 64.89 | 63.54 |
| Zm00001d023278_P002 | Maize | extracellular, vacuole | 65.69 | 63.5 |
| EES15586 | Sorghum | extracellular | 48.67 | 58.47 |
| HORVU5Hr1G045450.2 | Barley | peroxisome, plastid | 65.96 | 57.94 |
| KRH48846 | Soybean | cytosol | 27.93 | 34.43 |
| GSMUA_Achr8P09360_001 | Banana | plastid | 63.83 | 26.76 |
| KRG97357 | Soybean | cytoskeleton, cytosol, peroxisome | 33.78 | 19.72 |
| KRH58834 | Soybean | endoplasmic reticulum, plastid | 32.98 | 13.54 |
| KRH42738 | Soybean | nucleus, plastid | 32.98 | 13.54 |
| KRH08407 | Soybean | plastid | 4.26 | 2.83 |
| KRH70062 | Soybean | plastid | 3.99 | 2.67 |
| KRH06839 | Soybean | plastid | 3.72 | 2.5 |
| KRG94687 | Soybean | plastid | 3.72 | 2.49 |
Protein Annotations
| KEGG:00260+1.1.1.3 | KEGG:00270+1.1.1.3 | KEGG:00300+1.1.1.3 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | MapMan:35.1 |
| EntrezGene:732566 | ProteinID:ABG78600.1 | EMBL:ACUP02012301 | EMBL:DQ172918 | EnsemblPlantsGene:GLYMA_20G053200 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004072 | GO:GO:0004412 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006520 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 |
| GO:GO:0009058 | GO:GO:0009067 | GO:GO:0009082 | GO:GO:0009086 | GO:GO:0009088 | GO:GO:0009090 |
| GO:GO:0009097 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016491 | GO:GO:0016740 | GO:GO:0055114 | InterPro:HDH_CS | InterPro:HDH_cat | InterPro:HDH_short |
| EnsemblPlants:KRG89878 | ProteinID:KRG89878 | ProteinID:KRG89878.1 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00742 | PIRSF:PIRSF036497 |
| ScanProsite:PS01042 | UniProt:Q3S3F6 | SUPFAM:SSF51735 | SUPFAM:SSF55347 | UniParc:UPI00005ADF1D | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:-:12030018..12039480
Molecular Weight (calculated)
40662.8 Da
IEP (calculated)
6.612
GRAVY (calculated)
0.102
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNIPLILMG CGGVGRQLLQ HIVSCRSLHF TQGLCLRVVG VGDSKSLVVT EDLLHEGLND GFLLELCRVK SVGESLLKLL DFGKCQAFVH PESQGKILEI
101: AFQLGKKTGL VFVDCSASSD TVAVLKQAID MGCCAVMANK KPLTSTMEDF KKLFIYPRRI RHESTVGAGL PVIASLNRII SSGDPVHQII GSLSGTLGYV
201: MSEVEDGKPL SQVVRDAKSL GYTEPDPRDD LGGMDVARKA LILARILGHQ INLDSIQIES LYPKEMGPGV MTVEDFLNRG LLLLDKDIQD RVEKAASNGN
301: VLRYVCVIMG SRCEVGIQEL PKNSPLGRLR GSDNVLEIYT RCYSKQPLVI QGAGAGNDTT AAGVLADIVD IQDLFP
101: AFQLGKKTGL VFVDCSASSD TVAVLKQAID MGCCAVMANK KPLTSTMEDF KKLFIYPRRI RHESTVGAGL PVIASLNRII SSGDPVHQII GSLSGTLGYV
201: MSEVEDGKPL SQVVRDAKSL GYTEPDPRDD LGGMDVARKA LILARILGHQ INLDSIQIES LYPKEMGPGV MTVEDFLNRG LLLLDKDIQD RVEKAASNGN
301: VLRYVCVIMG SRCEVGIQEL PKNSPLGRLR GSDNVLEIYT RCYSKQPLVI QGAGAGNDTT AAGVLADIVD IQDLFP
001: MKKIPVLLMG CGGVGRHLLQ HIVSCRSLHA KMGVHIRVIG VCDSKSLVAP MDVLKEELND ELLSEVCLIK STGSALSKLG ALGGYRVVHD SELSTETEEI
101: AKLLGKSTGL AVVDCSASME TIEILMKAVD LGCCIVLANK KPVTSTLEHY DKLALHPRFI RHESTVGAGL PVIASLNRII SSGDPVHRIV GSLSGTLGYV
201: MSELEDGKPL SQVVQAAKKL GYTEPDPRDD LGGMDVARKG LILARLLGKR IIMDSIKIES LYPEEMGPGL MSVDDFLHNG IVKLDQNIEE RVKKASSKGC
301: VLRYVCVIEG SSVQVGIREV SKDSPLGRLR GSDNIVEIYS RCYKEQPLVI QGAGAGNDTT AAGVLADIID LQDLFH
101: AKLLGKSTGL AVVDCSASME TIEILMKAVD LGCCIVLANK KPVTSTLEHY DKLALHPRFI RHESTVGAGL PVIASLNRII SSGDPVHRIV GSLSGTLGYV
201: MSELEDGKPL SQVVQAAKKL GYTEPDPRDD LGGMDVARKG LILARLLGKR IIMDSIKIES LYPEEMGPGL MSVDDFLHNG IVKLDQNIEE RVKKASSKGC
301: VLRYVCVIEG SSVQVGIREV SKDSPLGRLR GSDNIVEIYS RCYKEQPLVI QGAGAGNDTT AAGVLADIID LQDLFH
Arabidopsis Description
Homoserine dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K6Y8]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.