Factsheet for HORVU5Hr1G045450.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid
MultiLoc:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G141000.2	Wheat	plastid	86.22	97.36
TraesCS5A01G142200.1	Wheat	plastid	87.38	97.14
TraesCS5D01G149900.1	Wheat	mitochondrion, vacuole	86.68	96.36
Os11t0128800-01	Rice	plasma membrane	77.34	86.2
Os12t0125400-01	Rice	plasma membrane	76.4	85.16
Zm00001d023278_P002	Maize	extracellular, vacuole	76.87	84.58
EES15586	Sorghum	extracellular	56.31	77.0
Solyc11g072010.1.1	Tomato	mitochondrion	59.35	67.73
CDY16591	Canola	mitochondrion	58.88	66.67
VIT_06s0009g01460.t01	Wine grape	mitochondrion, plastid	54.44	66.57
Bra002352.1-P	Field mustard	mitochondrion	58.41	66.14
KRG89878	Soybean	extracellular, plastid	57.94	65.96
AT5G21060.2	Thale cress	mitochondrion, plastid	58.18	65.87
CDX92414	Canola	mitochondrion	58.41	64.27
PGSC0003DMT400070475	Potato	mitochondrion	59.81	61.1
GSMUA_Achr8P09360_001	Banana	plastid	60.05	28.65
HORVU5Hr1G053950.1	Barley	plastid	30.84	14.12
HORVU5Hr1G121650.2	Barley	cytosol	7.24	7.79
HORVU5Hr1G121700.2	Barley	cytosol	3.04	4.45
HORVU5Hr1G121250.1	Barley	plastid	5.37	4.1
HORVU3Hr1G096500.10	Barley	plastid	3.97	2.93

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00270+1.1.1.3	KEGG:00300+1.1.1.3	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:35.1
UniProt:A0A287R126	InterPro:Asp/hSer_DH_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004412
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009082
GO:GO:0009086	GO:GO:0009088	GO:GO:0009097	GO:GO:0009987	GO:GO:0016491	GO:GO:0050661
GO:GO:0055114	InterPro:HDH_CS	InterPro:HDH_cat	InterPro:HDH_short	EnsemblPlantsGene:HORVU5Hr1G045450	EnsemblPlants:HORVU5Hr1G045450.2
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00742	PFAM:PF03447	PIRSF:PIRSF036497	ScanProsite:PS01042	PANTHER:PTHR43070
PANTHER:PTHR43070:SF4	SUPFAM:SSF51735	SUPFAM:SSF55347	UniParc:UPI000B4718A7	SEG:seg	:

Description

Homoserine dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287R126]

Coordinates

chrchr5H:+:351942061..351946868

Molecular Weight (calculated)

45372.7 Da

IEP (calculated)

5.042

GRAVY (calculated)

0.078

Length

428 amino acids

Sequence
(BLAST)

001: AAQTTEAPTE QLETLLPALG TLLQQLLSGP DETRRIEADP PFQMPQAQAR SVLPVVLLGC GGVGRHLLRH IVSCRPLHAN QGVAIRVVGV GDSTSLLVAD
101: DVRANGLDDA LLNDLCSAKS AGSPLSSLLA RGHCQVFNKP EAMGKVIDAA TMLGRTTGLV IVDCSATYDT VGVLKDAVDH GCCVVLANKK PLTCAYEDFK
201: KLTSHFRQIR FESTVGAGLP VIASVTRIIA SGDPVSRIVG SLSGTLGYVM SELEDGKKFS EVVKTAKALG YTEPDPRDDL SGMDVARKAL ILARLLGQQI
301: SMENIIVESL YPSELGPEVM STTNFLESGL TKLDETIEER VKAASLRGNV LRYVCVIGNT GCQVGLQEVP KDSALGRLRG SDNVVEIYSR CYESSPLVIQ
401: GAGAGNDTTA AGVLADIIDL QDLFQTRA

Best Arabidopsis Sequence Match ( AT5G21060.1 )
(BLAST)

001: MKKIPVLLMG CGGVGRHLLQ HIVSCRSLHA KMGVHIRVIG VCDSKSLVAP MDVLKEELND ELLSEVCLIK STGSALSKLG ALGGYRVVHD SELSTETEEI
101: AKLLGKSTGL AVVDCSASME TIEILMKAVD LGCCIVLANK KPVTSTLEHY DKLALHPRFI RHESTVGAGL PVIASLNRII SSGDPVHRIV GSLSGTLGYV
201: MSELEDGKPL SQVVQAAKKL GYTEPDPRDD LGGMDVARKG LILARLLGKR IIMDSIKIES LYPEEMGPGL MSVDDFLHNG IVKLDQNIEE RVKKASSKGC
301: VLRYVCVIEG SSVQVGIREV SKDSPLGRLR GSDNIVEIYS RCYKEQPLVI QGAGAGNDTT AAGVLADIID LQDLFH

Arabidopsis Description

Homoserine dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K6Y8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.