CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97357	Soybean	cytoskeleton, cytosol, peroxisome	96.39	45.65
KRH58834	Soybean	endoplasmic reticulum, plastid	85.25	28.38
KRH42738	Soybean	nucleus, plastid	84.92	28.28
KRG89878	Soybean	extracellular, plastid	34.43	27.93
KRG94687	Soybean	plastid	2.3	1.25
KRH08407	Soybean	plastid	2.3	1.24
KRH06839	Soybean	plastid	1.97	1.07
KRH70062	Soybean	plastid	1.97	1.07

Protein Annotations

KEGG:00260+1.1.1.3	KEGG:00270+1.1.1.3	KEGG:00300+1.1.1.3	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.4
UniProt:A0A0R0J1X4	EMBL:ACUP02004296	InterPro:Asp/hSer_DH_NAD-bd	EnsemblPlantsGene:GLYMA_07G116600	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004412	GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0050661	GO:GO:0055114	InterPro:HDH_cat	InterPro:HDH_short
EnsemblPlants:KRH48846	ProteinID:KRH48846	ProteinID:KRH48846.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00742	PFAM:PF03447
PIRSF:PIRSF036497	PANTHER:PTHR43070	PANTHER:PTHR43070:SF2	SUPFAM:SSF51735	SUPFAM:SSF55347	UniParc:UPI0006ED98E3

Description

hypothetical protein

Coordinates

chr7:-:12902874..12905709

Molecular Weight (calculated)

33964.3 Da

IEP (calculated)

5.279

GRAVY (calculated)

-0.310

Length

305 amino acids

Sequence
(BLAST)

001: MGSKELRQEK GEVANLEIFF QHVHGNHFIP NTVLVDCTAD SIIASNYEDW LRKGIHVITP NKKANSGPLY EYLRLRALQR QSYTHYFYEA TVGAGLPIIS
101: TLRGLLETGD RILEIEGIFS GTLSYIFNNF KDGRAFSEVV AEARDEGYTE PDPRDNLSGI DVARKVIILA RESGLKLELS DIPVENLVPE PLRGSSSAEE
201: FMQQLPKFDE ELTEILKDAE SSGEVLRYLG VVDVSNEKGV VELRRYKKDH PFAQLSGSDN IIAFTTRRYR NQPLIVRGPG AGAQVTAGGK FNDILRLASY
301: LGAPS

Best Arabidopsis Sequence Match ( AT5G21060.3 )
(BLAST)

001: MKKIPVLLMG CGGVGRHLLQ HIVSCRSLHA KMGVHIRVIG VCDSKSLVAP MDVLKEELND ELLSEVCLIK STGSALSKLG ALEKGGYRVV HDSELSTETE
101: EIAKLLGKST GLAVVDCSAS METIEILMKA VDLGCCIVLA NKKPVTSTLE HYDKLALHPR FIRHESTVGA GLPVIASLNR IISSGDPVHR IVGSLSGTLG
201: YVMSELEDGK PLSQVVQAAK KLGYTEPDPR DDLGGMDVAR KGLILARLLG KRIIMDSIKI ESLYPEEMGP GLMSVDDFLH NGIVKLDQNI EERVKKASSK
301: GCVLRYVCVI EGSSVQVGIR EVSKDSPLGR LRGSDNIVKI YSRCYKEQPL VIQGAGAGND TTAAGVLADI IDLQDLFH

Arabidopsis Description

Homoserine dehydrogenase [Source:UniProtKB/TrEMBL;Acc:F4K6Y8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.