Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 2
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G28730.1 | CDY24170 | AT3G47620.1 | 21798944 |
AT4G28730.1 | CDY36943 | AT3G47620.1 | 21798944 |
AT4G28730.1 | CDX89437 | AT4G25200.1 | 21798944 |
AT4G28730.1 | CDY03368 | AT4G25200.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra010351.1-P | Field mustard | plastid | 99.44 | 99.44 |
CDX97456 | Canola | plastid | 98.32 | 97.24 |
CDX92892 | Canola | plastid | 79.89 | 80.34 |
CDY50922 | Canola | plastid | 80.45 | 80.0 |
AT4G28730.1 | Thale cress | plastid | 77.65 | 79.89 |
CDY06875 | Canola | plastid | 75.98 | 77.71 |
CDY35215 | Canola | plastid | 74.86 | 77.46 |
GSMUA_Achr1P11150_001 | Banana | cytosol, plastid | 47.49 | 69.11 |
HORVU7Hr1G064020.2 | Barley | extracellular | 27.37 | 60.49 |
KRH32275 | Soybean | plastid | 52.51 | 56.63 |
OQU80669 | Sorghum | mitochondrion, plastid | 48.04 | 55.84 |
Zm00001d031856_P002 | Maize | plastid | 51.4 | 55.09 |
VIT_07s0005g04860.t01 | Wine grape | plastid | 54.75 | 55.06 |
Solyc06g083690.2.1 | Tomato | plastid | 55.87 | 54.64 |
KRH19662 | Soybean | plastid | 49.72 | 53.61 |
KRH55649 | Soybean | plastid | 48.6 | 53.05 |
TraesCS7B01G185700.1 | Wheat | plastid | 50.28 | 52.94 |
TraesCS7D01G289300.1 | Wheat | plastid | 50.28 | 52.94 |
TraesCS7A01G293400.1 | Wheat | plastid | 50.28 | 52.94 |
Zm00001d049886_P001 | Maize | plastid | 51.4 | 51.69 |
CDY05731 | Canola | plastid | 49.16 | 50.57 |
CDY31980 | Canola | plastid | 47.49 | 49.13 |
CDY44566 | Canola | cytosol | 27.37 | 44.14 |
CDY36849 | Canola | cytosol | 27.37 | 44.14 |
CDY16750 | Canola | cytosol | 26.82 | 41.38 |
CDX87275 | Canola | cytosol | 26.82 | 41.38 |
CDY16749 | Canola | cytosol | 27.37 | 39.2 |
CDX87276 | Canola | cytosol | 27.37 | 39.2 |
CDX84377 | Canola | cytosol | 25.7 | 38.33 |
CDY00348 | Canola | cytosol | 25.7 | 38.33 |
PGSC0003DMT400051717 | Potato | plastid | 54.75 | 37.26 |
CDX92459 | Canola | endoplasmic reticulum, golgi | 26.26 | 36.15 |
CDY16539 | Canola | endoplasmic reticulum | 26.26 | 35.61 |
Os08t0565800-01 | Rice | cytosol | 34.64 | 35.43 |
CDX81399 | Canola | extracellular, plasma membrane | 23.46 | 30.88 |
CDY18599 | Canola | extracellular, vacuole | 22.91 | 30.6 |
CDY15928 | Canola | cytosol | 26.26 | 30.13 |
HORVU7Hr1G064050.1 | Barley | mitochondrion | 28.49 | 29.82 |
CDX99634 | Canola | cytosol | 25.7 | 29.49 |
CDY45086 | Canola | endoplasmic reticulum | 25.7 | 25.0 |
Protein Annotations
MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078JND8 | UniProt:A0A078JND8 | EnsemblPlants:CDY68269 | ProteinID:CDY68269 |
ProteinID:CDY68269.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00072739001 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir |
InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | PFAM:PF00462 | PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 |
PANTHER:PTHR10168:SF14 | SUPFAM:SSF52833 | TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001D83ECD | SEG:seg |
Description
BnaA08g30760DBnaA08g30760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JND8]
Coordinates
chrLK037088:+:1266..2452
Molecular Weight (calculated)
19341.5 Da
IEP (calculated)
9.992
GRAVY (calculated)
-0.011
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTTFNTLR LVSSSLDSIP SISFSTSYSL SLISVGGITC SDVKRCLKHT CSVRAMSSSS AASSSSFGSR MEESVKKTVT ENVVVVYSKT WCSYCIEVKT
101: LFKRLGVQPL VIELNELGPQ GPQLQKVLER LTGQRTVPNV FVGGKHIGGC TDTVKLKRKG DLALMLAEAN GKTDQTLRK
101: LFKRLGVQPL VIELNELGPQ GPQLQKVLER LTGQRTVPNV FVGGKHIGGC TDTVKLKRKG DLALMLAEAN GKTDQTLRK
001: MAVTAFNTLK LVSSSLDPIP SVSCSSYSFS LIYVGSPYKR CLKQSCSVRA MTSSSSAASS SSSSFGSRME ESIRKTVTEN TVVIYSKTWC SYCTEVKTLF
101: KRLGVQPLVV ELDQLGPQGP QLQKVLERLT GQHTVPNVFV CGKHIGGCTD TVKLNRKGDL ELMLAEANGK NGQS
101: KRLGVQPLVV ELDQLGPQGP QLQKVLERLT GQHTVPNVFV CGKHIGGCTD TVKLNRKGDL ELMLAEANGK NGQS
Arabidopsis Description
GRXC5GrxC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UXL4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.