Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- golgi 5
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002306.1-P | Field mustard | golgi | 95.38 | 93.94 |
| CDY16539 | Canola | endoplasmic reticulum | 95.38 | 93.94 |
| AT5G20500.1 | Thale cress | endoplasmic reticulum | 83.08 | 80.0 |
| HORVU7Hr1G009480.1 | Barley | cytosol | 25.38 | 75.0 |
| HORVU7Hr1G110720.1 | Barley | cytosol | 46.15 | 72.29 |
| HORVU3Hr1G028600.1 | Barley | cytosol | 33.08 | 68.25 |
| VIT_11s0052g00500.t01 | Wine grape | endoplasmic reticulum, extracellular | 69.23 | 66.18 |
| Os06t0659500-01 | Rice | cytosol, plasma membrane | 37.69 | 63.64 |
| KRH37371 | Soybean | endoplasmic reticulum | 64.62 | 63.16 |
| KRH12368 | Soybean | endoplasmic reticulum | 63.85 | 61.94 |
| PGSC0003DMT400020793 | Potato | endoplasmic reticulum, extracellular | 65.38 | 59.44 |
| GSMUA_Achr7P04990_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 56.15 | 57.94 |
| TraesCS7A01G493400.1 | Wheat | mitochondrion, plastid | 60.0 | 57.78 |
| TraesCS7B01G404000.1 | Wheat | mitochondrion, plastid | 60.0 | 57.78 |
| TraesCS7D01G480900.1 | Wheat | mitochondrion, plastid | 60.0 | 57.78 |
| EER88767 | Sorghum | mitochondrion | 60.0 | 57.78 |
| HORVU7Hr1G110810.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 60.77 | 57.66 |
| Solyc11g069860.1.1 | Tomato | plastid | 63.08 | 57.34 |
| Zm00001d046900_P003 | Maize | mitochondrion | 58.46 | 56.3 |
| CDY45086 | Canola | endoplasmic reticulum | 76.15 | 53.8 |
| GSMUA_Achr1P10400_001 | Banana | plastid | 53.85 | 53.03 |
| CDY18599 | Canola | extracellular, vacuole | 53.08 | 51.49 |
| CDX81399 | Canola | extracellular, plasma membrane | 53.08 | 50.74 |
| CDX87276 | Canola | cytosol | 39.23 | 40.8 |
| CDY16750 | Canola | cytosol | 36.15 | 40.52 |
| CDY00348 | Canola | cytosol | 36.92 | 40.0 |
| CDY44566 | Canola | cytosol | 33.85 | 39.64 |
| CDY36849 | Canola | cytosol | 33.85 | 39.64 |
| GSMUA_Achr1P23530_001 | Banana | extracellular | 41.54 | 39.42 |
| CDY16749 | Canola | cytosol | 37.69 | 39.2 |
| CDX84377 | Canola | cytosol | 36.15 | 39.17 |
| CDX87275 | Canola | cytosol | 33.85 | 37.93 |
| CDY15928 | Canola | cytosol | 35.38 | 29.49 |
| CDX99634 | Canola | cytosol | 35.38 | 29.49 |
| CDY06875 | Canola | plastid | 38.46 | 28.57 |
| CDY35215 | Canola | plastid | 37.69 | 28.32 |
| CDX97456 | Canola | plastid | 38.46 | 27.62 |
| CDY68269 | Canola | plastid | 36.15 | 26.26 |
| CDY05731 | Canola | plastid | 34.62 | 25.86 |
| CDY31980 | Canola | plastid | 33.85 | 25.43 |
| CDX92892 | Canola | plastid | 34.62 | 25.28 |
| CDY50922 | Canola | plastid | 34.62 | 25.0 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:A0A078DVJ6 | EnsemblPlants:CDX92459 | ProteinID:CDX92459 | ProteinID:CDX92459.1 |
| InterPro:GLR_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00154229001 |
| InterPro:Glutaredoxin | InterPro:Glutaredoxin_euk/vir | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | PFAM:PF00462 | PRINTS:PR00160 |
| ScanProsite:PS00195 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF116 | SUPFAM:SSF52833 | SignalP:SignalP-noTM |
| TIGRFAMs:TIGR02180 | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE7B65 | SEG:seg | : | : |
Description
BnaA10g14980D
Coordinates
chrLK031872:-:766772..768088
Molecular Weight (calculated)
13905.6 Da
IEP (calculated)
6.943
GRAVY (calculated)
0.065
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRSISVLTL LVALAASISM ASSASSADFV KKTISSHKIV IFSKSYCPYC RRAKSVFSEL NQVPHVVELD EREDGGSIQS ALGEIVGRRT VPQVFINGKH
101: IGGSDDTVDA HESGELAKLL GVSESTRAEL
101: IGGSDDTVDA HESGELAKLL GVSESTRAEL
001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL
Arabidopsis Description
GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.