Factsheet for Os06t0659500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G009480.1	Barley	cytosol	48.05	84.09
HORVU7Hr1G110720.1	Barley	cytosol	89.61	83.13
HORVU3Hr1G028600.1	Barley	cytosol	62.34	76.19
EER88767	Sorghum	mitochondrion	90.91	51.85
GSMUA_Achr7P04990_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.42	51.59
TraesCS7D01G480900.1	Wheat	mitochondrion, plastid	89.61	51.11
TraesCS7A01G493400.1	Wheat	mitochondrion, plastid	89.61	51.11
Zm00001d046900_P003	Maize	mitochondrion	88.31	50.37
TraesCS7B01G404000.1	Wheat	mitochondrion, plastid	88.31	50.37
HORVU7Hr1G110810.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	89.61	50.37
GSMUA_Achr1P10400_001	Banana	plastid	76.62	44.7
VIT_11s0052g00500.t01	Wine grape	endoplasmic reticulum, extracellular	77.92	44.12
GSMUA_Achr1P23530_001	Banana	extracellular	74.03	41.61
KRH37371	Soybean	endoplasmic reticulum	70.13	40.6
KRH12368	Soybean	endoplasmic reticulum	70.13	40.3
AT5G20500.1	Thale cress	endoplasmic reticulum	68.83	39.26
CDX92459	Canola	endoplasmic reticulum, golgi	63.64	37.69
Bra020106.1-P	Field mustard	endoplasmic reticulum	64.94	37.59
Bra002306.1-P	Field mustard	golgi	63.64	37.12
CDY16539	Canola	endoplasmic reticulum	63.64	37.12
PGSC0003DMT400020793	Potato	endoplasmic reticulum, extracellular	67.53	36.36
Solyc11g069860.1.1	Tomato	plastid	67.53	36.36
Os02t0646400-01	Rice	extracellular	55.84	32.82
Os04t0508300-01	Rice	extracellular	42.86	29.46
Os02t0618100-01	Rice	plasma membrane	42.86	25.78
CDY45086	Canola	endoplasmic reticulum	55.84	23.37
Os08t0565800-01	Rice	cytosol	40.26	17.71

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A0P0X007	ProteinID:BAS98966.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783
GO:GO:0005794	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgr	InterPro:IPR002109	EnsemblPlantsGene:Os06g0659500	EnsemblPlants:Os06t0659500-01	PFAM:PF00462	PRINTS:PR00160
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF116	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0000E128F0

Description

GLUTAREDOXIN 18Similar to Glutaredoxin. (Os06t0659500-01)

Coordinates

chr6:+:27152706..27153945

Molecular Weight (calculated)

8727.3 Da

IEP (calculated)

4.536

GRAVY (calculated)

-0.543

Length

77 amino acids

Sequence
(BLAST)

1: KAVFKELELK KEPYVVELDQ REDGWEIQDA LSDMVGRRTV PQVFVHGKHL GGSDDTVEAY ESGKLAKLLN IDVKEDL

Best Arabidopsis Sequence Match ( AT5G20500.1 )
(BLAST)

001: MTMFRSISMV MLLVALVTFI SMVSSAASSP EADFVKKTIS SHKIVIFSKS YCPYCKKAKS VFRELDQVPY VVELDEREDG WSIQTALGEI VGRRTVPQVF
101: INGKHLGGSD DTVDAYESGE LAKLLGVSGN KEAEL

Arabidopsis Description

GRXC4Glutaredoxin-C4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFQ6]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.