Factsheet for Os02t0618100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
cytosol 2
plastid 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05437	Sorghum	cytosol	68.75	76.52
GSMUA_Achr1P24480_001	Banana	cytosol	60.16	72.64
Os04t0508300-01	Rice	extracellular	61.72	70.54
Solyc06g005260.2.1	Tomato	extracellular	59.38	70.37
PGSC0003DMT400049116	Potato	cytosol	59.38	70.37
PGSC0003DMT400001269	Potato	cytosol	57.03	67.59
VIT_14s0066g00960.t01	Wine grape	cytosol	60.16	67.54
KRH07180	Soybean	cytosol	56.25	67.29
GSMUA_Achr4P01420_001	Banana	cytosol	57.81	67.27
Zm00001d017240_P001	Maize	cytosol, extracellular	67.97	65.91
CDY44566	Canola	cytosol	54.69	63.06
CDY36849	Canola	cytosol	54.69	63.06
Bra025584.1-P	Field mustard	cytosol	54.69	63.06
AT5G40370.2	Thale cress	cytosol	51.56	48.53
CDY15928	Canola	cytosol	53.12	43.59
CDX99634	Canola	cytosol	53.12	43.59
Bra030333.1-P	Field mustard	cytosol	53.12	43.59
Os06t0659500-01	Rice	cytosol, plasma membrane	25.78	42.86
Os02t0646400-01	Rice	extracellular	34.38	33.59
Os08t0565800-01	Rice	cytosol	28.91	21.14

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A0P0VLU3	ProteinID:BAS79796.1	InterPro:GLR_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:Glutaredoxin
InterPro:Glutaredoxin_euk/vir	InterPro:Glutaredoxin_subgr	InterPro:IPR002109	EnsemblPlantsGene:Os02g0618100	EnsemblPlants:Os02t0618100-01	PFAM:PF00462
PRINTS:PR00160	ScanProsite:PS00195	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF122	SUPFAM:SSF52833
TIGRFAMs:TIGR02180	InterPro:Thioredoxin-like_sf	UniParc:UPI00039388D0	SEG:seg	:	:

Description

GLUTAREDOXIN 9Similar to Glutaredoxin-C4, chloroplastic. (Os02t0618100-01)

Coordinates

chr2:+:24566332..24568207

Molecular Weight (calculated)

13514.1 Da

IEP (calculated)

5.169

GRAVY (calculated)

-0.060

Length

128 amino acids

Sequence
(BLAST)

001: SSSSSSRPSD SEQLEEPSKP VMALDKAKEI VASSPVVVFS KTYCPFCARV KRLLAELAAS YKAVELDVES DGSELQSALA DWTGQRTVPC VFIKGKHIGG
101: CDDTMAMHKG GNLVPLLTEA GAIATPSL

Best Arabidopsis Sequence Match ( AT5G40370.1 )
(BLAST)

001: MAMQKAKEIV NSESVVVFSK TYCPYCVRVK ELLQQLGAKF KAVELDTESD GSQIQSGLAE WTGQRTVPNV FIGGNHIGGC DATSNLHKDG KLVPLLTEAG
101: AIAGKTATTS A

Arabidopsis Description

Glutaredoxin family protein [Source:UniProtKB/TrEMBL;Acc:B3H604]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.